Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2437 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAGATACTCTACCGTTTACAAAGGCAGGAAGAAGAAGACAATCGAGTATTTCGCCATCAAAAGCGTCGATAAATCACAGAAAACCAAGGTCCTTGAAGAAGTCAGGATTCTTCACACATTGGGCCATGTAAATGTGCTGAAATTTTACGATTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTACTGTGTTGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTCAACTTCCTGAAGACTCGGTTTATGATTTTGCTTATGATATAGTCAAAGCTTTGCAGTTTTTACATTCAAATGGAATAATCTATTGTGACCTGAAACCATCCAATATCCTACTAGATGAAAATGGATGTGCAAAGCTATGTGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAAGCTCCTTCTTCCTCGTTACCGCGAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGACAGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCACTAGGCTGTGTACTATATGAATGCTATGCTGGGAGGCCACCCTTTGTGGGAAGAGAATTCACCCAGCTTGTAAAATCCATCATTTCGGATCCGACTCCACCTCTCCCTGGTAATCCAAGTCGGCCTTTTGTCAATTTAATTAATTCCCTGTTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGAGAACCAAATTTACTCTGGTGTCTCTGCCTGCTCAACCTGCATTTGATGATATGATAGGGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAATCTTCCCATAACAGGACCCCTACCAAATATCGTGAAAAAGATGTCAAAGGGTTTTTGAGAAAGGATGAGAACTCTGTTTTAGGATCTAGAGGCATTGAGACACCAACAAGGGCAACACCAATTGGCCACAGAACTCAGACAAAGGGTTCTGGCAGAATACATGAGGTAAAGCAAAAAGATAATTCCAATATTAGCAAGGGTGTGAATCTTTTGAGACTGTCAAGAATAGCAAAAACAAATCTACAGAGAGAAAATGAGAAGGAAAACTATCGACGCCCCTTGCCTAATAACTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATGCTGAAGATGATGCGCATGAAGAAACTGATGGTGCCGAACAGACAACTCCTGTGCCTGATGAGAAAATGGTCAATCATTTTCTGAACCAGGGAAAAGCAGAGGAGGTTGAAAATAATACACACCAGTTGGACACCCCATCTGTTCACCCTCCAGTCTCAGATGATCCAAGGTCATTTGATCATGAATCAACTCCTGACCATCCTGACATATCTGCTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAACATAGAACTAAAGAAGACTCAGGATCTGGCCTTGACTCTGATTCTTCGAGGTTGTCTAACAACCTTTCCCAGGTTCTTTGGCATGCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTCAGAAGTCATTCCTTCACTCCCATTTGAGGCATTGCAAGCATCTGATTTTGTCAAGATGCCTAAAGAGCAATTGGAGGCAGTCCACAACCGAATATTATCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTTGAGATGTTGAGCAGTAATGCTGATGCAGCTAATATCTTGACCAATGGGCCAATAATGCTCATGCTTGTAAAATTGCAGCGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATCGGTTTGTTGATTAGGCACTCCACCTTTGTTGATGACAGTTTGGCTAGTTCTGGAATTTTAGGTGCACTGACTGATGGCCTTAGAGACAGACAGGAAAAAGTAAGGAGGTTCTCCATGGCTGCTTTGGGTGAGTTACTATTTTATATATCCACTCAAAATGCAGACTGCAGGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGAATGCGCATGGCTGGCAGGTTCCAAATTCATTAATATCACTTGTGTCATCAATATTGCGGAAGGGAGAGGATGATATAACTCAATTATATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGTTCATGGGTGGGGCGTTTGTCCAGTCAAGATGTAATTAGTAATCTCTGCTATATCTATAGGGCCTCAGGGAAACAAGAGAGTATGAGACTCACTGCAGGATCATGCTTGGTGCGCTTAGTTCGTTTTAATCCTCCTAGCATTCAGTCGGTGATAGAGAAACTCTCATTCAAGGACCTATCTTCTGCTCTTGTCAAGGGCAGTCCACGAGAGCAACAAATCAGCTTAAATCTTCTTAACATGGCAATGCTTGGAAGCCACATGTTCACAAATATTGGAAGATACCTTGTTTCACTTGCTGAGGATAAAAATCTGATCCCAAGTCTTTTGGGTCTTGTTGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTAGTCCTTGTGGCTCTCCTCTGTAAGCATGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGCCAAAAGTTACTCTCTGTAGTGGATAGGCTGGGAAAAGAGAAGGATGCTTATGTGAGGCAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTACTTGATATAATAACAGGGGATATCCAGCAAATGATGGGAGGAAGGCGCCATGGACACATCTCTGCCCTTACCAGCAGATCTGCCCCAAAACCCAACATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGGAACTTCAACTTTTAAGCACAAAGTAGTTACACCACAAGTCTTACGGCAGTTGGCGAATCTAATTAAACTCGTGGAGACATCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTGTGATTATTGGCAATCCTGACATTTTCATACGTGAAATCCTCCCTAGTCTGACAGTTCTCTACAAGGGTAACAAGGACGGTGATGCCAGATTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGACGGATCTGAAATTCGTATCCAATACCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATCTATGCGCAGAAGCTTCTTGTCATGCTAATGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATCTGAAGACAATTTCACAATGCTTCGAGTTCTTGCTTGGCGATCTCTCAAATGCAAATGTGAACAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAGATGGAGTCCAAATTACTCTCTCAGTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATATGCAAAGGGTATGGAAGATTTGCTGGAACCAACTCTTGGGTTGTGTAAGGCTTTTCTAGCACGTTCAGTTAGCTGCACAAAAGGCTTCAGCTACACAACAGAACTAATTCTCTTAGGTGACTGTCCTCCCGAGTTGAGTGGTGGCGCTGTCGATCCCCAACAATGCATAAAAGATATAGCGGACTTTGGAAGCAATGTCGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCTGATATAGCTTCTGAATGTGTTGTCTTACTGCTCAAGGCAGCTCCTAGAGAAGCCACCACTGGTATACTAACCAATCTCCCCAAGGTGACTGTGATCCTAGAGAGCTGGAGTAGAGGCATTCCTCACTTGATCATCCAGCGAATGCTTCACGCTTTAGGCTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTATCAATATCCAAACCTGAGATTTCAAGAACTGAAGTCATAGTTTCTGAACTCAAAAATTCAGGTGTACCAGCTTTAGCCAAAACAGCTGGGCTGGCAGCCTTGGAATTGCAGCGGTTGCCTCGTTGCATTTGA 4113 0.4252 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLGHVNVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVYDFAYDIVKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDSGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWRTKFTLVSLPAQPAFDDMIGLHAKPCLSERNGDKSSHNRTPTKYREKDVKGFLRKDENSVLGSRGIETPTRATPIGHRTQTKGSGRIHEVKQKDNSNISKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENAEDDAHEETDGAEQTTPVPDEKMVNHFLNQGKAEEVENNTHQLDTPSVHPPVSDDPRSFDHESTPDHPDISAISPSVSPQVKKHRTKEDSGSGLDSDSSRLSNNLSQVLWHASDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILSILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLMLVKLQRQSKASALRVQLASLIGLLIRHSTFVDDSLASSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRNAHGWQVPNSLISLVSSILRKGEDDITQLYALRTIENICSQGGSWVGRLSSQDVISNLCYIYRASGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLSSALVKGSPREQQISLNLLNMAMLGSHMFTNIGRYLVSLAEDKNLIPSLLGLVEQGSEVLRGKALVLVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDAYVRQCLDAFVHIVASSIPGLLDIITGDIQQMMGGRRHGHISALTSRSAPKPNIHLFPVVLHLLGTSTFKHKVVTPQVLRQLANLIKLVETSFQGRDDFQITLLRIFESLTEESPVIIGNPDIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIEEEQRLTDLKFVSNTRFLPLYPTLIEDEDPIPIYAQKLLVMLMEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVYAKGMEDLLEPTLGLCKAFLARSVSCTKGFSYTTELILLGDCPPELSGGAVDPQQCIKDIADFGSNVGVLLELSASAETSIADIASECVVLLLKAAPREATTGILTNLPKVTVILESWSRGIPHLIIQRMLHALGYACKQYLLHAMILSISKPEISRTEVIVSELKNSGVPALAKTAGLAALELQRLPRCI* 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2437 1370 Gene3D Transferase(Phosphotransferase) domain 1 1 304 - -
Gso11g2437 1370 CDD STKc_ULK4 3 257 - -
Gso11g2437 1370 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2437 1370 MobiDBLite consensus disorder prediction 320 355 - -
Gso11g2437 1370 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gso11g2437 1370 SUPERFAMILY ARM repeat 570 920 IPR016024 -
Gso11g2437 1370 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Gso11g2437 1370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Gso11g2437 1370 MobiDBLite consensus disorder prediction 373 397 - -
Gso11g2437 1370 MobiDBLite consensus disorder prediction 450 509 - -
Gso11g2437 1370 Gene3D - 554 916 IPR011989 -
Gso11g2437 1370 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2437 1370 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2437 1370 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1367 IPR044591 GO:0000911|GO:0000914|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2437 Gso-Chr11 40378382 40385081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2437 2 258 MAP Kinase Kinase Kinase AT3G13530 31.818 5.61e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Gso11g2437 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2437 K17545 - gmx:100777288 2691.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0835 15 7664860 7672427 Gso11g2437 11 40378382 40385081 GST