Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2436 ATGGAGTGCAATAAAGAAGAAGCCATAAGGGCCAAGGAACTTGCTGAAAAGAAAATGCAAAATAAAGATTTCAACGGGGCTCGAAAATTTGCTATTAAGGCTCAGCAGCTATATCCTGACTTGGAGAATATCACTCAAATGCTTATTGTTTGTGATGTGCATTGCTCTGCTGAGCAGAAATTGTTTAGCAATGAGATGGACTGGTATAAAATTCTTCAAATTGAGCTGACGGCTAATGATACAACAATTAAGAAGCAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTTTGGATAGAGAAAAACGATCTAGACTTGACATGAATTTGCGCAGGGTTCCAATGAACAGAACTACTATGCCATCTCATCATCAGCAGAATGTTCAGATGAATTTTAATCCTGTGATGCAAACCAGTGTCAGGCCCAATTTTACAAACTTAAATCCTCAGCAGCCACAACCGTCTAGGCAGGCATCTCAGCAGGTGCCTAATGGTGGCTGCCCTACTTTTTGGACCGTGTGCTCATTTTGTTCTGTTAGATATGAGTATTATAGGGAGGTTTTAAACAGATCTCTTCGCTGTCAACATTGCAGTAGGCCCTTCATTGCATATGATGTGAATATGCAAGGCACAACACCAGCAACTAATTCAAGTCAGCAAGCTTTTGGTGTGCAGAACCATAGTCAGAATCATGGTGCTTTCAACGTTGGTGCTGGATCTCAAGGTAATTTGCATACTCGCAGGTCCAATACAGAATCACATAAGAAAAAAGGTCCCACTGCTGATGTCTCTGTAAAGCCAAATGGAAAGAGGAAGAGAAAGCAAGTAGCAGAGTCCAGTGAAAGTGCCGAATCTGTTGGCAGCACTGATTCTGAATCTGAAGAGGATATACTTTATGATAAGGATGGCTTTTCTACTCTTAGAGAAGAGAATCCACGTAGATCTACGCGACAAAAGCATCAGGTTTCCTACAATGAGAATGTGAGTGATGATGATGAAGGGGGTGGATCTCCTTCTGGTGCTGGAGAAAATACTGGGGAGCCATCTAAAATGAATAATCAGAATGGTTTGGCTGCTGATCTGAAAGGCAATAAACAAGGGGAAAAGCGGAAGCAGAACTTTTATTCTGAAGAGAGCTTACAAAATATAGATGAAGAAATTAAGGAGGTGAGAGAAAAAGAGGCAGTTGGCAGCTCAAAGATAGACAAAGCTTCAGAGCATTCACCCTCGAAATCAACAAATCGACCAGATGATTTTGTTTACCCAGACGCAGAGTTCAGTGACTTTGACAAAGACAAGAAAGAGGGGTCTTTTGCTGTTGGGCAGATTTGGGCTATTTATGATACTATAGATGGTATGCCTAGATTCTATGCTGTAATCAGAAAAGTTTTCTCTCCTGGATTCAAGTTGCGGATAACATGGTTTGAACCAGATCCAAATGAGCAAGATCAGGTTCACTGGGTAGAAGAGGAATTGCCAATTGCTTGCGGGAAACATAAACTTGGCATCACTGATACCACTGAAGATCGTCTGATGTTCTCTCATCTGATTGTTTGTGAAAAGATTGGGCGCTGTACTTATAAAGTATATCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGCATATGGATGCAGAATCTCATCGTGAGTATGATTTTGAATTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGTGGGAGTAGTTGTTTCGTACTTGGCTAAATTGAAAGGCTTTGTATGTCTCTTCTCTCGAATGGAGGGAGGTAATCGCACATTTCAAATTCCATCTAGCGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCTGGTGTTCCTGTAGGATCTTATGAACTTGATCCGGTATCCTTGCCAATGAATCTTGAAGAGATTGCTGTTCCTGAACATTTGGAAGTAAAGGATGGTCATTGTCCATCTAGTGGGGTGGGCACAAGATCTTCAGATATGTGGAAATTCACGATGAACTCGGAGGGAGATGCTTCTACTGCAAAGGTTAAGTTGCAAAGAAACAATTCAGCAGAGGAGAACAAGGATCCTGTTAATCATATTGGTAATGATAGTGATCCTTCAGCTTCAGCTGCAGATGCTTTTGAAATTCCGGATCCTGAGTTCTGCAATTTTGATGCTAAGAGGTCCCTTGAAATGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGTGATGAGGATGGACTGCCAAAATACTATGGTCATATTAAGAAGGTTAGGACTAGTCCAGATCTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGCTACCGGAGAAATGTGTTAAATGGGAAGATAAGGATATGCTTATTTCTATTGGAAGATTTAAAATCAAAGCAGGTGCTCATCCCTGCACATATGCAAACACCTATTCTGTTTCGCATCAGGTGCAGGTTATTAACGATGGTAAGAAGAAGGAATATGAAATTTTTCCAAGGAAAGGCGAAATCTGGGCATTGTATAGGAATTGGACGACTAAAATAAAACGTTCTGACTTGTTAAACCTGGAATATGACATAGTTGAAGTTGTTGGAGAACAAGATTTGTGGATGGATGTTTTACCTTTGGAGTTGGTAAGCGGTTATAATTCAGTTTTCAAGCGCAAGTCCAATGCAGGATCAGCTAGGGCCACGAAAATATACTGGAAAGATTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTCGAACTGACAGAAGAACAAGATGGCAATCTGAGAGGCTTCTGGGAACTTGATCCGGGAGCAGTACCCCTTCATTATTTTAACAGCAAATAA 2907 0.4087 MECNKEEAIRAKELAEKKMQNKDFNGARKFAIKAQQLYPDLENITQMLIVCDVHCSAEQKLFSNEMDWYKILQIELTANDTTIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSRLDMNLRRVPMNRTTMPSHHQQNVQMNFNPVMQTSVRPNFTNLNPQQPQPSRQASQQVPNGGCPTFWTVCSFCSVRYEYYREVLNRSLRCQHCSRPFIAYDVNMQGTTPATNSSQQAFGVQNHSQNHGAFNVGAGSQGNLHTRRSNTESHKKKGPTADVSVKPNGKRKRKQVAESSESAESVGSTDSESEEDILYDKDGFSTLREENPRRSTRQKHQVSYNENVSDDDEGGGSPSGAGENTGEPSKMNNQNGLAADLKGNKQGEKRKQNFYSEESLQNIDEEIKEVREKEAVGSSKIDKASEHSPSKSTNRPDDFVYPDAEFSDFDKDKKEGSFAVGQIWAIYDTIDGMPRFYAVIRKVFSPGFKLRITWFEPDPNEQDQVHWVEEELPIACGKHKLGITDTTEDRLMFSHLIVCEKIGRCTYKVYPRKGETWALFKNWDIKWHMDAESHREYDFEFVEILSDYVEGVGVVVSYLAKLKGFVCLFSRMEGGNRTFQIPSSELFRFSHRVPSFKMTGQERAGVPVGSYELDPVSLPMNLEEIAVPEHLEVKDGHCPSSGVGTRSSDMWKFTMNSEGDASTAKVKLQRNNSAEENKDPVNHIGNDSDPSASAADAFEIPDPEFCNFDAKRSLEMFQVGQIWAFYGDEDGLPKYYGHIKKVRTSPDLELQVTYLTNCWLPEKCVKWEDKDMLISIGRFKIKAGAHPCTYANTYSVSHQVQVINDGKKKEYEIFPRKGEIWALYRNWTTKIKRSDLLNLEYDIVEVVGEQDLWMDVLPLELVSGYNSVFKRKSNAGSARATKIYWKDLLRFSHQIPAFELTEEQDGNLRGFWELDPGAVPLHYFNSK* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2436 968 MobiDBLite consensus disorder prediction 412 434 - -
Gso11g2436 968 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 966 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 161 183 - -
Gso11g2436 968 Pfam Domain of unknown function (DUF3444) 738 944 IPR024593 -
Gso11g2436 968 Pfam Domain of unknown function (DUF3444) 439 643 IPR024593 -
Gso11g2436 968 CDD DnaJ 67 120 IPR001623 -
Gso11g2436 968 MobiDBLite consensus disorder prediction 319 348 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 274 300 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 412 442 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 250 268 - -
Gso11g2436 968 SUPERFAMILY Chaperone J-domain 63 147 IPR036869 -
Gso11g2436 968 MobiDBLite consensus disorder prediction 250 398 - -
Gso11g2436 968 Pfam DnaJ domain 67 128 IPR001623 -
Gso11g2436 968 Gene3D DnaJ domain 64 172 IPR036869 -
Gso11g2436 968 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gso11g2436 968 MobiDBLite consensus disorder prediction 703 735 - -
Gso11g2436 968 SMART dnaj_3 66 123 IPR001623 -
Gso11g2436 968 PANTHER - 1 966 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 384 398 - -
Gso11g2436 968 MobiDBLite consensus disorder prediction 363 381 - -
Gso11g2436 968 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso11g2436 968 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso11g2436 968 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2436 Gso-Chr11 40369632 40374780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2436 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.681 1.99e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2436 - - gmx:100779228 1959.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0836 15 7674364 7679627 Gso11g2436 11 40369632 40374780 GST
Gso7g2136 7 45185465 45189758 Gso11g2436 11 40369632 40374780 PCT
Gso17g0172 17 1598867 1602916 Gso11g2436 11 40369632 40374780 PCT
Gso11g2436 11 40369632 40374780 Gso7g2136 7 45185465 45189758 PCT
Gso11g2436 11 40369632 40374780 Gso17g0172 17 1598867 1602916 PCT