Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2399 ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTAGAGGTGGACTTCTTTACTGAATACGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATAAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAACATATTCTGTTACCTCCTTCTAGAAGGGAATTCAAGGATATATATGTTGTCTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAGCATTACCAGTTTTTTTTGTATCAGCTTCTTCGAGGCATGAAGTATATACATACAGCAAATGTTTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGCGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACTCCAACTGCTATTTTCTGGACAGATTATGTTGCAACCAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTGACGGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGAAAGAAGAAGCCTGTTCCTCTCTCGCAGAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGTTAGAAAAAATGTTGGCATTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCCTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGACGCCGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGATTCTGGAGTATCATCCAAAGATGTTGAAGGAATTTCTAGAGGGATCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGGGGGACTGTTACTCCCCCTGAGAGGCAACATGCATCATTACCAAGACCTTGTGTATTGTATTCAGACCACTCAATGCAGAATACATCTGAGGTTGCAGATGACCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGATAGCAGTAGTGCCATCCCTATGTCTCGACTTCCTTTACAAGCACCCCAAAATATTCAAGGTGTTGCTGCAAGGCCCGGAAAGGTTGTGGGTTCAGTAATGCGTTACAACAACTGTGGGGTAGCCGGGACGGCCGAGGCTGAACAGCGTCGGGTGGTCAGGAATCCATCTGTTTCAGCTCAGTACGCAGCATCGAGCTGTTCATATCCTAGGAGAAACTCAGGCTATAAAAGTGAGAGGGGGACAGAGGAGGGTGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTGGCTGCTGCTCAAGCTGGACCTGGTGGTCAGTGGTATTGA 1692 0.4374 MLPDQRKKSSVEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPLSQKFPNADPLALRLLEKMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGSEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDHSMQNTSEVADDLSKCCIKEVEKQPIDSSSAIPMSRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAGTAEAEQRRVVRNPSVSAQYAASSCSYPRRNSGYKSERGTEEGGIEGSNGLQPKPQYMARKVAAAQAGPGGQWY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2399 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gso11g2399 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2399 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Gso11g2399 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Gso11g2399 563 MobiDBLite consensus disorder prediction 515 545 - -
Gso11g2399 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso11g2399 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2399 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso11g2399 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gso11g2399 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gso11g2399 563 CDD STKc_TDY_MAPK 24 361 - -
Gso11g2399 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2399 Gso-Chr11 40010388 40016857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2399 1 563 MAP Kinase Gene Family AT5G19010 80.662 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso11g2399 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2399 - K04371 gmx:100814013 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0867 15 7987758 7994019 Gso11g2399 11 40010388 40016857 GST
Gso7g2161 7 45370039 45376755 Gso11g2399 11 40010388 40016857 PCT
Gso17g0148 17 1395320 1407954 Gso11g2399 11 40010388 40016857 PCT
Gso11g2399 11 40010388 40016857 Gso7g2161 7 45370039 45376755 PCT
Gso11g2399 11 40010388 40016857 Gso17g0148 17 1395320 1407954 PCT