Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2366 ATGATCTCGTCAATGAAATGCACAGCCTCATCTCTCACATGTTCTGCTTTCTCAAACAGAAAGCTTTCCATTGCAAGGCCTCAACTCGTGACATTACCAACCATCAACAACGTTGAACAAAACATGGGTCCCTCTCAGTTGTGTTCACAGAAGCCTCTCTACCTTTCATCCACCGAGAACTTGGCATTGGTGAGGAGAAGGAGAGTGACGGAGTGCCAGGCCTATGAAGCTGACAGGTCACGGCCTCTGGAGATCAACATTGAGCTGCCGGCTGAAGAGGCGGCGCAGAGGTTCAAGATTGGTGTGTATTTTGCTACATGGTGGGCTTTGAATGTAGTTTTCAACATTTACAATAAGAAGGTTTTGAATGCTTTTCCTTACCCATGGCTCACCTCCACTTTGTCCCTTGCTGCTGGCTCCCTCATGATGTTAGTCTCATGGGCCACCAGGGTTGCTGAGGTCCCAAAAGTCAACTTGGACTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCAGCTTTCAGTGTCCTTGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCAATGCCGGTTTATCTGTCACTGCTGCCAATTATTGGTGGTTGTGCACTAGCTGCAGTGACTGAGCTCAATTTCAACATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCCGCAATATATTCTCAAAGAAAGGGATGAAGGGAATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATAATGTCACTGTTAATTCTGACACCTTTTGCCATTGCTGTTGAGGGCCCCAAGGTTTGGGCTGCAGGCTGGCAAACAGCTGTATCTCAAATTGGTCCCAATTTTGTATGGTGGGTAGCTGCACAGAGTGTCTTTTACCACTTGTACAATCAAGTCTCATACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGCATTGGAAACACAATGAAGAGGATTTCGGTCATTGTTTCTTCCATCCTTATCTTTCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTAA 1176 0.4609 MISSMKCTASSLTCSAFSNRKLSIARPQLVTLPTINNVEQNMGPSQLCSQKPLYLSSTENLALVRRRRVTECQAYEADRSRPLEINIELPAEEAAQRFKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRVAEVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2366 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gso11g2366 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 388 - -
Gso11g2366 391 PANTHER SOLUTE CARRIER FAMILY 35 26 391 - -
Gso11g2366 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
Gso11g2366 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 26 391 - -
Gso11g2366 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2366 Gso-Chr11 39642378 39645468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2366 36 391 Antiporters AT1G61800 81.180 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2366 K15283 K05350 gmx:100804205 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0124 17 1152419 1156856 Gso11g2366 11 39642378 39645468 PCT