Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2362 ATGCAAACTGTGGTGGAGCTTATTGTGTTGGTGCCCAATCACAAATCTCTTGAAGGATTTGTAATAAAGGGCCAGACCAGGCACCATCACCAAAGTTTGATTAAAATGGGTTGCTTCCCATGCTGTAAGTCAGAGGCTGAATCATCCTCTTCAAATGCATCCGCCGGAAAAATTTCCAAAGGAAGGAGAACATTCAAATCATTGGCTTCAGTTATGTCACATAAAACAGGTAGTAGCAGGCAAAGACGGATAGATGCAGAGATAAGAAAATATGGATCAGCAAAAAACGATGTCAAAGTATTCACATATGCACAACTTGCTGAAGCTACAAACAACTACAATTCTGATTGCCTGGTTGGCGAAGGTGGATTCGGGAATGTCTACAAAGGATTCTTAAAAAGTGTTGATCAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGCGCAAGGAACACGAGAATTTTTTGCAGAGATTTTGATGTTGAGCATGGTGCAACACCCAAATCTTGTGAAGCTCGTTGGTTATTGTGCAGAAGACCAACATAGGATTTTGGTTTATGAATTCATGTCCAATGGGAGTTTGGAAAATCACCTTTTAGACATAGGTGCAGATAAGGAGCCTATGGATTGGAAGAATAGAATGAAAATAGCAGAGGGAGCAGCTAGAGGACTTGAATATTTGCATAACGGTGCAGATCCAGCTATTATATACCGTGATTTTAAATCATCTAATATACTATTAGATGAAAATTTTAATCCAAAGCTCTCTGATTTTGGACTTGCTAAGATTGGTCCAAAAGAAGGTGAGGAGCATGTGGCAACTAGGGTGATGGGGACTTTTGGTTATTGTGCACCAGAGTATGCTGCTTCGGGTCAGCTTAGCACAAAGTCAGATATTTATAGTTTTGGGGTTGTGCTTTTGGAAATAATCACAGGTAGGAGGGTATTTGACACTGCAAGAGGCACAGAAGAGCAAAACTTGATTGACTGGGCACAACCTTTGTTTAAGGACAGAACGAAGTTCACTCTAATGGCTGATCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGTCTGTTTCAAGCCCTTGCAGTAGCAGCAATGTGTCTCCAAGAGGAACCTGACACACGACCTTACATGGACGACGTTGTGACGGCTCTTGCACATCTAGCAGTGCACAGAGTTGAAGAAAAGGACATAGCTGGTGAATCTGTAATATGTGCCGGGCATGTTGAATCTTTTAGAGCTATAAGTTCAGCTGGATCTGGGAGGACGTAG 1278 0.421 MQTVVELIVLVPNHKSLEGFVIKGQTRHHHQSLIKMGCFPCCKSEAESSSSNASAGKISKGRRTFKSLASVMSHKTGSSRQRRIDAEIRKYGSAKNDVKVFTYAQLAEATNNYNSDCLVGEGGFGNVYKGFLKSVDQTVAVKVLNREGAQGTREFFAEILMLSMVQHPNLVKLVGYCAEDQHRILVYEFMSNGSLENHLLDIGADKEPMDWKNRMKIAEGAARGLEYLHNGADPAIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKEGEEHVATRVMGTFGYCAPEYAASGQLSTKSDIYSFGVVLLEIITGRRVFDTARGTEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEPDTRPYMDDVVTALAHLAVHRVEEKDIAGESVICAGHVESFRAISSAGSGRT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2362 425 Gene3D Phosphorylase Kinase; domain 1 72 189 - -
Gso11g2362 425 CDD STKc_IRAK 119 387 - -
Gso11g2362 425 ProSiteProfiles Protein kinase domain profile. 113 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2362 425 PANTHER OS07G0668900 PROTEIN 36 423 - -
Gso11g2362 425 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Gso11g2362 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Gso11g2362 425 Pfam Protein kinase domain 115 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2362 425 PANTHER RECEPTOR SERINE/THREONINE KINASE 36 423 - -
Gso11g2362 425 Gene3D Transferase(Phosphotransferase) domain 1 190 407 - -
Gso11g2362 425 SUPERFAMILY Protein kinase-like (PK-like) 97 385 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2362 Gso-Chr11 39601520 39604090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2362 36 392 Glycoside Hydrolase AT3G07070 53.444 1.69e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso11g2362 Pkinase 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2362 - - gmx:100305361 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0894 15 8328000 8332702 Gso11g2362 11 39601520 39604090 GST