Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2342 ATGGCTCAGAAGGCCCAGAAAAACGACACTGAGTTTAAGGTCCCCGAACCCATCATCAACCCCTGCACCACCACCACCACCACCACCACCTCGATTTCCGAACCTTCTAGATTCTTCGATGCAACCACCCCCGCCACTTCATCGCGCTCCCCAAAGCGATCCCTCCCTCTCGACGAGGAATCTCAGACGGACCAAACGACGTCTTCTGAGCCCAAACGCGCCGTGAACCGCTGCTCCGGCTGCCGGCGGCGCGTGGGACTCACGGGATTCCGGTGCCGCTGCGGGGACCTTTTCTGCGCAGAGCACCGCTACTCCGACCGCCACGACTGCTCCTACGACTACAAGGCCGCGGGGAGAGAGGCCATCGCGAGAGAGAACCCCGTCGTGAAGGCCGCGAAGATCGTCAAAGTCTGA 414 0.6159 MAQKAQKNDTEFKVPEPIINPCTTTTTTTTSISEPSRFFDATTPATSSRSPKRSLPLDEESQTDQTTSSEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2342 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 137 - -
Gso11g2342 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Gso11g2342 137 MobiDBLite consensus disorder prediction 1 75 - -
Gso11g2342 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Gso11g2342 137 Gene3D - 47 133 IPR035896 -
Gso11g2342 137 SUPERFAMILY AN1-like Zinc finger 60 131 IPR035896 -
Gso11g2342 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Gso11g2342 137 MobiDBLite consensus disorder prediction 19 52 - -
Gso11g2342 137 MobiDBLite consensus disorder prediction 60 74 - -
Gso11g2342 137 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2342 Gso-Chr11 39417784 39418776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2342 54 137 C2H2 Transcription Factor Family AT3G52800 54.762 1.10e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2342 - - gmx:100794830 275.789