Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2339 ATGGAAGAAAGCAAAGGAAGAGTGTGTGTTACAGGAGGTACAGGTTTTATTGGTTCATGGATAATCAAGAGGCTCCTTGAAGATGGTTACTCTGTTAACACCACTGTGAGACCCGATCCAGGGTGTATGGGAGTTTTCCATGTTGCTACACCAGTCGACTTTGAATTAAGAGAACCAGAAGAAGTAGTGACCAAAAGATCCATTGAAGGTGCACTTGGCATTTTGAAGGCATGCCTCAATTCCAAGACAGTGAAGCGAGTTGTTTACACCTCTAGTGCCTCTGCTGTCGATAACAATAAAGAAGAAATTATGGATGAAAGCTCATGGAACGACGTGGATTATCTTAGATCTTCAAAGCCATTTGGTTGGTCATATTCTGTTTCAAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAAAATGGATTGGATGTTGTCACACTAATTCCAACTCTTGTTTTTGGACCCTTCATTTGTCCAAAGCTTCCAAGCTCAGTTCGTAATTCATTGGATTTTATACTTGGAGAAAAGGGTACATTTGGTGTCGTTCTACAGACAGATATGGTGCATGTGGATGACGTGGCTAGGGCACATATATTTCTGCTTGAACATCCTAATCCAAAAGGGAGGTATATTTGTTCACAATGTTCAGTAACTTATGAAAGGATCTCCAAACTTGTTTCTGCCAAATATCCAGAATTTCAACCACCACCTGTAGAGTCTCTGAATCATATTGAAGGTACAAAAGGATCATATTTGTCATCAAAGAAGCTGATAGATGCAGGATTTGTGTACAAGTATGGACTTGAGGAAATGGTTGATGATGCCATCCAATGCTGCAAAGAAAAGGGTTACCTGTGA 867 0.4025 MEESKGRVCVTGGTGFIGSWIIKRLLEDGYSVNTTVRPDPGCMGVFHVATPVDFELREPEEVVTKRSIEGALGILKACLNSKTVKRVVYTSSASAVDNNKEEIMDESSWNDVDYLRSSKPFGWSYSVSKTLTEKAVLEFGEQNGLDVVTLIPTLVFGPFICPKLPSSVRNSLDFILGEKGTFGVVLQTDMVHVDDVARAHIFLLEHPNPKGRYICSQCSVTYERISKLVSAKYPEFQPPPVESLNHIEGTKGSYLSSKKLIDAGFVYKYGLEEMVDDAIQCCKEKGYL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2339 288 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 38 - -
Gso11g2339 288 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 41 280 - -
Gso11g2339 288 CDD FR_SDR_e 8 265 - -
Gso11g2339 288 Gene3D - 41 288 - -
Gso11g2339 288 Gene3D - 5 40 - -
Gso11g2339 288 Pfam NAD dependent epimerase/dehydratase family 8 35 IPR001509 -
Gso11g2339 288 Pfam NAD dependent epimerase/dehydratase family 45 209 IPR001509 -
Gso11g2339 288 PANTHER VESTITONE REDUCTASE-LIKE 6 38 - -
Gso11g2339 288 PANTHER VESTITONE REDUCTASE-LIKE 41 280 - -
Gso11g2339 288 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 286 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2339 Gso-Chr11 39397393 39400214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2339 2 279 Miscellaneous Gene Families AT4G27250 35.061 2.38e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2339 - K13265 gmx:547570 567.77