Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2326 ATGGGGGATGATGGAAAGAAGATTAGTGGAGAGGGGGGGTTAGTGAAGGTTGAGCCAAAACCCAGCAATGGTTTCACCTCAAAAGTGGTTGATTTGTTGGAGAAATTGGTGGTGAAGTTCTTGTATGATTCTTCACTGCCCCATCACTACCTCACTGGTAATTTTGCTCCCGTGAGTGAGACCCCTCCAACCAAGGACCTTCCTGTCAAAGGGTACCTTCCGGATTGCTTGAATGGGGAGTTTGTCAGAGTTGGGCCTAATCCGAAGTTTGCTCCTGTAGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGCTTGCGCATCAAAGATGGAAAAGCTACATATGTTTCCCGTTTTGTGAGAACTTCTCGCCTTAAACAAGAAGAATACTTTGGAGGCTCCAAATTTATGAAGATTGGAGATCTCAAAGGTCTATTCGGACTTTTAATGGTTAACATACATATGCTGAGAACTAAATGGAAAGTGCTGGATGCTTCTTATGGAACTGGAACAGCTAATACTGCTCTCGTATATCACCATGGGAAACTTCTAGCACTCTCAGAAGCAGATAAACCCTATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGCATGCTAGATTATGACAAGAGATTGGGCCACTCCTTCACTGCTCATCCAAAAGTTGACCCATTTACTGGGGAGATGTTTACATTTGGCTATGCGCATACACCACCATATATCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCCATAACAGTATCAGATCCCATCATGATGCACGACTTTGCCATCACAGAGAATTATGCAATATTTTTGGATCTTCCTTTGATTTTTAGGCCAAAGGAAATGGTGAAGAATAAGACACTGATATTCTCATTTGATTCAACCAAGAAAGCTCGTTTTGGTGTGCTACCTCGGTATGCTAAGGATGAAAAGCTTATTAGATGGTTTGAGTTACCCAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAAGATGAAGTTGTTCTGATCACATGCCGCCTTCAGAATCCAAATTTGGATTTGGTCGGTGGGACTGCCAAGGAAAAGCTTGAAAATTTCTCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACGGGTGAAGCTTCTCAAAAGAAACTATCAGCATCTGCTGTAGATTTTCCTAGGGTGAATGAGAGCTACACTGGAAGGAAGCAGCGATATGTATACGGAACCACATTAGACAGCATTGCAAAAGTTACTGGCATTATTAAATTTGATTTGCATGCTGAACCGGATAATGGAAAAACAAAACTTGAAGTAGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTATGGCTCGGAAGCTGTTTATGTCCCTCGTGTCCCTGGTACCGATTCTGAAGAAGATGATGGATACTTGATTTGTTTTGTACACGATGAAAATACCGGAAAATCATTTGTGCATGTCATCAATGCAAAAACAATGTCAGCAGATCCTGTTGCAGTTGTCGAATTGCCGCATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGAACAACTGCAAGAGCAGGGTAAACTGTGA 1632 0.4185 MGDDGKKISGEGGLVKVEPKPSNGFTSKVVDLLEKLVVKFLYDSSLPHHYLTGNFAPVSETPPTKDLPVKGYLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNIHMLRTKWKVLDASYGTGTANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFTFGYAHTPPYITYRVISKDGYMHDPVPITVSDPIMMHDFAITENYAIFLDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEKLIRWFELPNCFIFHNANAWEEEDEVVLITCRLQNPNLDLVGGTAKEKLENFSNELYEMRFNMKTGEASQKKLSASAVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDNGKTKLEVGGNVQGLYDLGPGKYGSEAVYVPRVPGTDSEEDDGYLICFVHDENTGKSFVHVINAKTMSADPVAVVELPHRVPYGFHAFFVTEEQLQEQGKL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2326 543 PANTHER BETA-CAROTENE DIOXYGENASE 4 539 IPR004294 GO:0016702
Gso11g2326 543 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 4 539 - -
Gso11g2326 543 Pfam Retinal pigment epithelial membrane protein 55 532 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2326 Gso-Chr11 39205990 39212476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2326 K00465 - gmx:100789210 1114.75