Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2313 ATGGTGAAGGACACTGCATATTATGACATATTAGGTGTCAATTTTGATGCATCTGCTGCAGAGATCAAGAAGGCTTATTATGTCAAGGCTAGAATTGTTCACCCCGATAAAAATCCTGGGGATCCTAAGGCCGCAGAAAATTTTCAGAAACTTGGTGAGGCTTACCAGGTTTTAAGTGATCCTGGGAAGCGTGCAGCATATGATGAGCATGGAAAGGAGGGAGTACCACAAGATTCCATGATGGACCCTACAACTGTATTTGGAATGATTTTTGGAAGTGAATATTTTGAAGAATATATTGGAAAACTTGCACTTGCTTCTTTATCATCTATAGAAATCGAGGAAGACTCACAGGATCCTGAAGTTCTGAGGCAGAGAATTCAAGAAAAGATGAAAGCATGGCAGAAGGAAAGGGAGCAGAAGCTTTCAACAATTCTGAAAGATCGCCTGCAACCATTTGTTGATGATCGAGAAGATGAATTTACAGCATGGGCACAATCAGAAGCACGTAGTCTTTCTAAAGCTGCTTTTGGAGAAGCCATGCTACATACAATTGGTTACATCTACACGCGAAAATCTGCAAGAGAACTTGGAAAGGATATGCGGTATATGAATGTTCCCTTTTTGGCAGAGTGGGTGCGAGACAAAGGACACCGTATAAAATCACAAGTAACAGCAGCCTCAGGAGCTGTGTCCCTCATTCAAATACAAGAAGAACTCAAGAAGCTAAACCAAGGAGAAAACAAAGAAGAAAGCATAGTCAAAGCTATTGAAGATAAGAAGGATGCCATGATTAATTCTCTATGGCAGATCAATGTTATTGATATTGAATCAACTCTGTCACGTGTTTGCCAAGCTGTTCTTAAAGATCCAAGTGCCTCCAAAGATGTTCTGAAGTCTCGAGCCAAAGCATTGAAAAAGTTAGGAACTATCTTTCAAGGTGCTAAGTCTGCTTATAACAGAGAAAACAGCCTACGCAAGGAAAGTGACAAAACATCAGATGCTGCTTCCTCATCATAG 1020 0.4059 MVKDTAYYDILGVNFDASAAEIKKAYYVKARIVHPDKNPGDPKAAENFQKLGEAYQVLSDPGKRAAYDEHGKEGVPQDSMMDPTTVFGMIFGSEYFEEYIGKLALASLSSIEIEEDSQDPEVLRQRIQEKMKAWQKEREQKLSTILKDRLQPFVDDREDEFTAWAQSEARSLSKAAFGEAMLHTIGYIYTRKSARELGKDMRYMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKEESIVKAIEDKKDAMINSLWQINVIDIESTLSRVCQAVLKDPSASKDVLKSRAKALKKLGTIFQGAKSAYNRENSLRKESDKTSDAASSS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2313 339 SUPERFAMILY Chaperone J-domain 2 99 IPR036869 -
Gso11g2313 339 Pfam DnaJ domain 7 68 IPR001623 -
Gso11g2313 339 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gso11g2313 339 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gso11g2313 339 PRINTS DnaJ domain signature 43 63 IPR001623 -
Gso11g2313 339 PRINTS DnaJ domain signature 63 82 IPR001623 -
Gso11g2313 339 Coils Coil 124 144 - -
Gso11g2313 339 CDD DnaJ 7 60 IPR001623 -
Gso11g2313 339 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Gso11g2313 339 SMART dnaj_3 5 63 IPR001623 -
Gso11g2313 339 PANTHER BNAA01G05380D PROTEIN 1 329 - -
Gso11g2313 339 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 329 - -
Gso11g2313 339 Gene3D DnaJ domain 1 87 IPR036869 -
Gso11g2313 339 Pfam X-domain of DnaJ-containing 135 324 IPR026894 -
Gso11g2313 339 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2313 Gso-Chr11 39066585 39073389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2313 7 69 Miscellaneous Gene Families AT1G16680 52.308 1.20e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2313 - - gmx:100787075 662.914