Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2297 ATGAAAACAATATCACCTTCAACTCTTGCTCTAGTTTTATTCTATCTTTGCAACATCTTTTACTTGGAGGCTTTCAATGGTGGCTTTAGTGTGGAGATGATCCACCGTGACTCATCAAGATCACCATTCTTTCGTCCCACAGAAACTCAATTCCAACGAGTTGCTAATGCCGTCCATCGTTCCGTCAATCGTGCCAATCATTTCCACAAAGCTCATAAGGCCGCTAAGGCCACTATAACACAAAATGATGGTGAATATCTAATCAGCTATTCAGTTGGAATCCCTCCGTTTCAACTTTATGGTATTATTGATACAGGTAGTGACATGATTTGGTTGCAGTGTAAACCTTGTGAAAAATGTTACAACCAAACCACTCCTATATTTGATCCTTCAAAATCTAACACATACAAAATCCTTCCCTTTTCTTCTACTACATGTCAATCTGTTGAAGATACCTCTTGTTCCTCTGATAATAGGAAAATGTGTGAATATACTATTTACTATGGGGATGGATCATACTCACAAGGAGAACTTAGTGTGGAAACCCTAACTTTAGGCTCCACCAATGGCTCATCTGTCAAATTTCGTAGAACCGTGATAGGTTGTGGACGTAACAATACTGTCTCCTTTGAAGGCAAAAGCTCGGGCATAGTTGGCCTAGGAAATGGACCTGTGTCGCTAATAAATCAATTGAGACGTCGTTCTTCTTCAATAGGTAGAAAGTTTTCCTATTGTTTGGCTTCAATGTCTAACATATCTAGCAAACTCAATTTTGGAGATGCTGCTGTGGTTTCTGGGGATGGGACTGTCTCAACTCCAATAGTCACACATGACCCAAAAGTATTTTACTACCTAACCTTGGAAGCATTCAGTGTGGGAAACAATAGAATAGAGTTTACAAGCTCCTCATTTAGATTTGGTGAAAAGGGAAATATCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAAATGATATTTACTCAAAGTTGGAATCAGCAGTAGCAGATCTGGTTGAATTAGACCGTGTTAAGGATCCACTTAAACAGTTGAGCCTTTGCTACAGAAGTACTTTTGATGAACTAAATGCACCAGTGATCATGGCACATTTTAGTGGTGCAGATGTCAAGTTAAATGCTGTCAACACCTTTATCGAAGTGAAACAAGGGGTAACATGCTTGGCTTTCATTTCTAGTAAAATTGGTCCCATCTTTGGGAACATGGCTCAGCAAAACTTCTTGGTTGGCTATGATCTTCAAAAGAAAATTGTCTCCTTTAAGCCCACAGATTGCAGCAAGCAGTGA 1305 0.3946 MKTISPSTLALVLFYLCNIFYLEAFNGGFSVEMIHRDSSRSPFFRPTETQFQRVANAVHRSVNRANHFHKAHKAAKATITQNDGEYLISYSVGIPPFQLYGIIDTGSDMIWLQCKPCEKCYNQTTPIFDPSKSNTYKILPFSSTTCQSVEDTSCSSDNRKMCEYTIYYGDGSYSQGELSVETLTLGSTNGSSVKFRRTVIGCGRNNTVSFEGKSSGIVGLGNGPVSLINQLRRRSSSIGRKFSYCLASMSNISSKLNFGDAAVVSGDGTVSTPIVTHDPKVFYYLTLEAFSVGNNRIEFTSSSFRFGEKGNIIIDSGTTLTLLPNDIYSKLESAVADLVELDRVKDPLKQLSLCYRSTFDELNAPVIMAHFSGADVKLNAVNTFIEVKQGVTCLAFISSKIGPIFGNMAQQNFLVGYDLQKKIVSFKPTDCSKQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2297 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 11 432 - -
Gso11g2297 434 ProSiteProfiles Peptidase family A1 domain profile. 86 427 IPR033121 -
Gso11g2297 434 Pfam Xylanase inhibitor N-terminal 86 260 IPR032861 -
Gso11g2297 434 Gene3D Acid Proteases 62 258 IPR021109 -
Gso11g2297 434 PANTHER OS07G0603500 PROTEIN-RELATED 11 432 - -
Gso11g2297 434 Pfam Xylanase inhibitor C-terminal 283 427 IPR032799 -
Gso11g2297 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Gso11g2297 434 Gene3D Acid Proteases 259 434 IPR021109 -
Gso11g2297 434 SUPERFAMILY Acid proteases 79 432 IPR021109 -
Gso11g2297 434 CDD pepsin_A_like_plant 85 431 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2297 Gso-Chr11 38885523 38886891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2297 84 433 Miscellaneous Gene Families AT1G77480 27.822 7.80e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2297 - - gmx:100790081 856.284