Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2267 ATGTCGAAGGCAGTTTCAGAATCTATTGATATTAGGGCTTACGATGTTTTCCTCAGTTTTAGAGGAGAAGACACTAGACGCAGTTTCACGGGTAATCTCTACAATTATTTGGAGAAAAGGGGAATCCATACCTTCATTGGCGACTACGATTTTGAGAGTGGAGAGGAAATCAAAGCATCACTTTCGGAGGCGATTGAACGTTCAAGAGTTTTCGTTATAGTGTTCTCCGAGAACTATGCTTCTTCTTCTTGGTGCTTAGATGAACTTGTACGTATCCTTGACTTCACCGAGGATAACCATCGACCGGTTATTCCAGTTTTCTATTACGTTGATCCGTCCGATGTGAGACATCAGAAGGGGATCTATGGAGAAGCACTGGCTATGCATGAGAGAAGACTCAACCACGAGTCGTACAAAGTCATGAAATGGAGGAACGCACTGCGTCAAGCTGCTACTTTGTCCGGTTGGCCTTTCAAACATGGCGATGGATATGAATACGAGTTGATTGAGAAGATTGTGGAGGACATTTCCAACAAGATTAAGATTAGTCGACCTGTTGTGGATCGCCCAGTTGGCCTCGAGTATCGAATGCTTGAAGTAAACTGGCTGCTGGATGCCACATCCCTTGCTGGAGTACATGTGATAGGGATTTGTGGCATGGGTGGCATTGGAAAAACAACACTTGCCCGTGCTGTATACCATTCCGCTGCTGGCCACTTTGATACCTCGTGTTTCCTTGGTAACGTCAGGGAAAATGCTATGAAGCATGGCTTAGTGCATCTCCAGCAAACCCTGCTTGCTGAGATATTCCGTGAGAACAATATTCGTCTGACAAGTGTCGAGCAAGGAATTTCACTAATAAAGAAGAGGCTCCACAGGAAGAGGCTTCTTTTGGTTCTTGACGATGTCCGTGAGCTAGAGGACTTGCAGGCTCTTGTTGGAAGTCCTGATTGGTTTGGCCCTGGCAGCAGAGTCATCATTACCACTAGAGACAGACAGTTGCTTAAAGCCCATGGGGTTGACAAGGTATACGAGGTAGAAGTTTTGGCCAACGGTGAAGCTCTCAAATTGCTTTGTTGGAAGGCCTTCAGAACCGACAGAGTTCATCCAGATTTCATTAGTAAATTAAACCGTGCAATCGCTTTTGCTTCTGGCATTCCTTTGGTTCTTGAACTTATAGGTTCAAGCTTGTATGGTAGAGGAATAGAAGAATGGGAATCTACTTTGGATCAGTATGAAAAAAATCCTCATAGAGACATACACATGGCACTTAAAATATCCTTCGATGCTCTGAGTTACCTCGAGAAGGAGGTTTTTCTAGACATTGCATGTTTCTTCAATGGATTTGAATTAGCAGAGATCGAGCATATACTTGGTGCACATCACGGTTGCTGTTTGAAAATTCATATTGGAGCATTGGTGGAAAAATCTCTTATAATGATTGACGAGCATGGCTGTGTTCAGATGCATGATTTGATGCAACAAATGGGTAGAGAAATTGTTCGACAGGAATCACAGGAGCACCCTGGCAAACGCAGTAGGTTATGGTCTACTGAGGATATAGTTCGTGTTTTAGAAGATAACACAGGAACATCTAAAATCCAAAGTATAATTCTGGATTTCTCCAAATCTGAAGAAGTGGTACAATGGGATGGAATGGCCTTCGTGAAGATGATAAGCCTCAGAACACTTATTATCAGAAAGGAGTGTTTTTCCAAAGGTCCAAAAAAACTTCCAAATAGCTTAAGAGTGCTGGAGTGGTGGGGCTATCCCTCAAAGTCTTTACCATCCGATTTTAAGCCAGAGAAACTAGCTATACTGAAGTTACCCTATAGTGGCTTTATGTCACTTGAGTTGCCAAACTTTTTGCATATGAGAGTTTTGAATTTTGACAGGTGTAAATTTTTAACACGGACACCTGATTTATCTGGTGCCCCAATTTTAAAAGAATTATCTTCTGTTTTTTGTGAGAATTTAGTTGAAATTCATGATTCGGTTGGATTCCTAGATAAACTTGAAATCATGAACTTTGAGAGTTGTAGCAAGCTTGAGACTTTTCCACCAATCAAGTTGACCTCTCTTGAAAGCATCAACTTTTCGTATTGTTCAAGTCTTGTGAGTTTTCCTGAAATATTAGGAAAGATGGAAAACATAACGCATCTTTCTTTGGAGTACACTGCCATAAGTAAATTACCAAATTCAATTAGAGAACTTGTCCGACTTCAAAGTTTAGAACTGCACAACTGTGGAATGGTTCAGTTACCGAGTAGCATTGTCACATTGCGAGAACTTGAGGTGTTGAGTATTTGCCAATGTGAAGGGTTGCGATTTTCAAAACAGGACGAAGATGTGAAAAATAAGAGCTTACTGATGCCCTCTTCATATTTGAAACAAGTCAATTTATGGTCCTGCAGTATATCTGATGAATTCATTGATACAGGACTCGCTTGGTTTGCCAATGTGAAAAGCTTAGATCTTTCAGCAAATAATTTTACAATTCTTCCTTCATGCATCCAAGAATGTCGCCTTTTGAGGAAACTATATTTGGACTACTGTACGCATCTTCATGAAATTAGGGGGATTCCACCCAATTTAGAAACATTATCTGCAATTCGGTGCACATCCTTGAAAGATTTAGACCTTGCAGTTCCTCTTGAATCCACCAAAGAAGGTTGCTGTTTGAGACAACTTATTTTGGATGATTGTGAGAATCTTCAAGAAATTAGAGGGATTCCACCAAGCATAGAGTTTTTGTCTGCAACAAACTGCAGATCCTTGACTGCCTCATGTAGGAGAATGCTACTGAAACAGGAGTTGCATGAGGCTGGAAATAAGAGATATTCTTTGCCAGGAACAAGGATTCCAGAATGGTTTGAGCACTGCAGCAGGGGACAATCAATTTCCTTTTGGTTTCGTAACAAGTTCCCAGTAATATCTCTCTGTCTTGCTGGACTCATGCATAAGCACCCTTTTGGACTTAAACCTATTGTGTCCATTAATGGCAATAAAATGAAGACCGAGTTTCAAAGGAGATGGTTTTATTTCGAGTTCCCAGTATTAACTGATCATATACTTATATTTGGTGAAAGGCAGATTAAATTTGAAGATAATGTGGATGAAGTAGTTTCAGAAAATGATTGGAATCATGTAGTGGTCTCTGTTGATGTTGATTTCAAATGGAACCCAACAGAGCCGCTTGTTGTGCGGACTGGACTCCATGTAATCAAACCAAAAAGTAGCGTGGAAGATATTCGATTCATTGATCCTTATAAACCCACCTTCTTATAA 3288 0.4072 MSKAVSESIDIRAYDVFLSFRGEDTRRSFTGNLYNYLEKRGIHTFIGDYDFESGEEIKASLSEAIERSRVFVIVFSENYASSSWCLDELVRILDFTEDNHRPVIPVFYYVDPSDVRHQKGIYGEALAMHERRLNHESYKVMKWRNALRQAATLSGWPFKHGDGYEYELIEKIVEDISNKIKISRPVVDRPVGLEYRMLEVNWLLDATSLAGVHVIGICGMGGIGKTTLARAVYHSAAGHFDTSCFLGNVRENAMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKRLHRKRLLLVLDDVRELEDLQALVGSPDWFGPGSRVIITTRDRQLLKAHGVDKVYEVEVLANGEALKLLCWKAFRTDRVHPDFISKLNRAIAFASGIPLVLELIGSSLYGRGIEEWESTLDQYEKNPHRDIHMALKISFDALSYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKIHIGALVEKSLIMIDEHGCVQMHDLMQQMGREIVRQESQEHPGKRSRLWSTEDIVRVLEDNTGTSKIQSIILDFSKSEEVVQWDGMAFVKMISLRTLIIRKECFSKGPKKLPNSLRVLEWWGYPSKSLPSDFKPEKLAILKLPYSGFMSLELPNFLHMRVLNFDRCKFLTRTPDLSGAPILKELSSVFCENLVEIHDSVGFLDKLEIMNFESCSKLETFPPIKLTSLESINFSYCSSLVSFPEILGKMENITHLSLEYTAISKLPNSIRELVRLQSLELHNCGMVQLPSSIVTLRELEVLSICQCEGLRFSKQDEDVKNKSLLMPSSYLKQVNLWSCSISDEFIDTGLAWFANVKSLDLSANNFTILPSCIQECRLLRKLYLDYCTHLHEIRGIPPNLETLSAIRCTSLKDLDLAVPLESTKEGCCLRQLILDDCENLQEIRGIPPSIEFLSATNCRSLTASCRRMLLKQELHEAGNKRYSLPGTRIPEWFEHCSRGQSISFWFRNKFPVISLCLAGLMHKHPFGLKPIVSINGNKMKTEFQRRWFYFEFPVLTDHILIFGERQIKFEDNVDEVVSENDWNHVVVSVDVDFKWNPTEPLVVRTGLHVIKPKSSVEDIRFIDPYKPTFL* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2267 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Gso11g2267 1095 Gene3D - 348 432 IPR042197 -
Gso11g2267 1095 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Gso11g2267 1095 SUPERFAMILY L domain-like 552 935 - -
Gso11g2267 1095 PRINTS Disease resistance protein signature 214 229 - -
Gso11g2267 1095 PRINTS Disease resistance protein signature 290 304 - -
Gso11g2267 1095 PRINTS Disease resistance protein signature 383 397 - -
Gso11g2267 1095 PRINTS Disease resistance protein signature 689 705 - -
Gso11g2267 1095 Pfam TIR domain 13 183 IPR000157 GO:0007165
Gso11g2267 1095 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 888 960 - -
Gso11g2267 1095 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 16 876 - -
Gso11g2267 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 156 IPR035897 -
Gso11g2267 1095 Gene3D - 10 180 IPR035897 -
Gso11g2267 1095 Pfam NB-ARC domain 210 421 IPR002182 GO:0043531
Gso11g2267 1095 Gene3D Ribonuclease Inhibitor 524 703 IPR032675 -
Gso11g2267 1095 Gene3D Ribonuclease Inhibitor 704 941 IPR032675 -
Gso11g2267 1095 SMART till_3 13 153 IPR000157 GO:0007165
Gso11g2267 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 876 IPR044974 GO:0006952
Gso11g2267 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 888 960 IPR044974 GO:0006952
Gso11g2267 1095 SUPERFAMILY "Winged helix" DNA-binding domain 419 526 IPR036390 -
Gso11g2267 1095 Gene3D - 181 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2267 Gso-Chr11 38469264 38473490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2267 12 785 WRKY Transcription Factor Family AT4G12020 32.258 5.42e-90 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2267 - - gmx:100817027 2092.78