Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2266 ATGAATATGTCGCTACACTTTCCATTCGAAGTCATGTCGGAACCCAAGACATCTGAAGTGCTGATCAGCTGCGCCAAAGATACATACCAAGGTTTTGCGGGCGATCTCTTAAGATCTCTCGAAGTATGCGGATTCTCCGTTAAGGTAGTCTCAGAAGACCATCGGGATCTTAAGGAAGAGGAAACTGAATGCGTCAGGATTTTCATTATTGTTTTTTCCCATCACTATGCAACTTCTTCATCTCGTTTGGATAAACTTACCGAGATCGTAAATAAGTACGGTGCGGCAGAAGATCGACGCATTTTTCCAGTTTTCTTCGAGGTGGAACCGTCTCATGTACGCTTTCAAAAAGGTAGTTTTGATATAGCCTTTGATTCTCATGCCAACCATGTGGAGCCTGGGTGCTTAGACAGGTGGATAATTACTCTGAAAGAAGTAACTGATTTTTCTGGCTGGAGTCTCAATCGGTCCGGGAATACATATCAACACCAGGTTATTGAGAATATAGTTCAAAAGGTCTCTGACCATGTTTCTTGCTCAGTTGGATTACCTTGTCGAGTGGAGAAAGTTAATGATCTTTTGAAATCTGAATCTGACGATAGAGTGAGGGTTTTGGTATATGGAGAAGCTGGAATAGGCAAAACAACTGTAGTTCGTGGAGTTTGTCGTTCCAATGGGGGGAAATTTGCCTATTATTGCTTTCTTGAGAAGGTGGGAGAAAATTTAAGGAATCATGGATCAGTACATCTCATAAGGATGCTTTGCTCTAAAATAATTGTTGACAATGATAGTGAGTCTGGAACTGAAGAAGAAATATTACGGAAGAAGGGAAAACAACTGGGAAAGTCTCTTTTGGTTTTTGAAGACATTTTTGATCAAGAGCAGTTGGAATACATTGTTAAAGTAGCATATGACTGCTTTAGTTTCAACTCCAAAGTCATCATTACAGCTGAGAAAAATTGTTTCCTAAAATGTCCTGAGATTGAAATATATGAGGTAGAAAGGCTCACAGAGAAAGAGAGTATTGAATTGTTTAATTTGAAAGTGTTTAATTCTCGGTATCTAGAAATTACGTATTTGGGAATTATCGCACGAGCAGTAACTATGGCTTCTCGGGTTCCATATACTTTGGAACTGATAGCTTCCTACTTTCGTGAAAAAAGTGCAGAACAGTGTCAGTATATATTAGATGAATTTGAAAAAATTCCAAATGAAAACAAGAAACAAGTGATAGTTCAAATGATCTTTGATGCTTTGAGCAATGATCAGAAGAAAATGTTAATTCATATTGCCTATAACCTCATTGGACAAAAAAAGGCAATAGTTGAAGACAGACTTCATCATCTTTTTGGTGTCTGGGCAAAAGATGGTATTAACATGTTGCTTCATAAATCTCTTGTAAAGATTGATGAGCAAGGTCAGGTGACAATGCACCACTTGACACATAACATGGTAAAAGATATGGAGTATGGCAAAAAAGAAGACCAACCTGCATCAAATTATGGTAGCATGTGTGATTCGGTGGAATTGGACAAAAACGGGCATGTCATGGAAGAAACCCAACCTTCCTCAAATGATTACGAACCTATGGAATGTGAATATCAAAATTGTTCTACCTCCTCTTCTTGA 1629 0.3831 MNMSLHFPFEVMSEPKTSEVLISCAKDTYQGFAGDLLRSLEVCGFSVKVVSEDHRDLKEEETECVRIFIIVFSHHYATSSSRLDKLTEIVNKYGAAEDRRIFPVFFEVEPSHVRFQKGSFDIAFDSHANHVEPGCLDRWIITLKEVTDFSGWSLNRSGNTYQHQVIENIVQKVSDHVSCSVGLPCRVEKVNDLLKSESDDRVRVLVYGEAGIGKTTVVRGVCRSNGGKFAYYCFLEKVGENLRNHGSVHLIRMLCSKIIVDNDSESGTEEEILRKKGKQLGKSLLVFEDIFDQEQLEYIVKVAYDCFSFNSKVIITAEKNCFLKCPEIEIYEVERLTEKESIELFNLKVFNSRYLEITYLGIIARAVTMASRVPYTLELIASYFREKSAEQCQYILDEFEKIPNENKKQVIVQMIFDALSNDQKKMLIHIAYNLIGQKKAIVEDRLHHLFGVWAKDGINMLLHKSLVKIDEQGQVTMHHLTHNMVKDMEYGKKEDQPASNYGSMCDSVELDKNGHVMEETQPSSNDYEPMECEYQNCSTSSS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2266 542 MobiDBLite consensus disorder prediction 517 542 - -
Gso11g2266 542 MobiDBLite consensus disorder prediction 514 542 - -
Gso11g2266 542 Gene3D - 19 179 IPR035897 -
Gso11g2266 542 Pfam TIR domain 65 186 IPR000157 GO:0007165
Gso11g2266 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 429 IPR027417 -
Gso11g2266 542 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 152 IPR035897 -
Gso11g2266 542 Pfam NB-ARC domain 187 405 IPR002182 GO:0043531
Gso11g2266 542 ProSiteProfiles TIR domain profile. 16 173 IPR000157 GO:0007165
Gso11g2266 542 SUPERFAMILY "Winged helix" DNA-binding domain 409 489 IPR036390 -
Gso11g2266 542 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 494 - -
Gso11g2266 542 Gene3D - 183 448 IPR027417 -
Gso11g2266 542 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 494 IPR044974 GO:0006952
Gso11g2266 542 SMART till_3 17 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2266 Gso-Chr11 38457672 38464262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2266 181 484 WRKY Transcription Factor Family AT5G45050 26.115 3.06e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2266 - - gsj:114373847 1093.95