Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2265 ATGCAAGCCTTTAGCTACTTGGTTGAGCCCTTCAAATATCATGTGTTCCTCAGCTTCAGAGGCAAAGATACACGCTTCACTTTTACTGGCAACCTCTACCGTGCTCTCCGAGATCGGGGATTCTGCGTCTTCATGGATGATCAGAGAATTGACAAGGGGGAGAAAATATCTCAAGAACTCCCCAAGGCGATTGAGGAGTCCAGGATTTATATTATCGTTTTATCTGAGAATTTTGCTTCTTCCCGGTATTGCTTAGTTGAAGTTGTTATGATTCTTGATGAGTTCGCTAAGGGGAAGGGTCGATGGATTGTGCCGGTTTTCTTCTACGTCGATCCCTCTGTTCTGGTTCGTACTTATGAACCGGCATTGGCGAACCAGAAGAAGTGGTCTAGTGATGACAAAATTGAAGAATGGAGGACTGCTTTGACTAAATTATCTAAATTTCCTGGCTTCTGTGTCAGCAGGGACGGGAATATATTTGAATACCAACATATTGATGAAATCGTTAAAGAGGTCTCTAGACATGTTCTCTGCCCAATTGGACTTGATGAAAAAATATTTAAGGTTAACTTGCTTTTGTCCTCTGGATCAGATGGAGTCCGCATGATTGGGATATGCGGAGAAGCTGGGATTGGTAAAATAACTTTAGCCCATGAAGTTTTTCACTTCAACGCTGACAAGGTATTTGATCACTGTCTCCTTTTTTATGACGTGGGAGGAATTTCAAATCAGTCTGGAATTTTATCAATACTCCATGGAAAAAGGGTTTTTATAATTTTTCAAGATATTAAACATTTCAAGCAGTTGGAAGACATCCGAGAACTAACTAAGCAGCTTGGTTCTGGCAGCAAAGTCATCATTACTGCTCAAGATAAACATTTGCTTGATAGATGTGGGATTGGATTTGAAAGTATATATGAAATAAAAAGGTTTAGTGATTCAGAAGCTGATCAATTTCTTAAATTCAAAGTTCTTAATTCTGCAACTGTTAGTCCAAAGTATGTGAACATTCTAAACCGAATCAAGTCTTATGCCCTTGGTCATCCATGGACTTTGGAAGTAATATGTTCCAACTTGAGTGGAAAATCAATAGAAGAATGTGAATCTGCATTACTCAAGTATGAATCTATAACAGATAGAGACATCCAAAAGATACTAGAAGTAAGCTTTAGTGCTTTGGAAAAATGTCAGCAGCAGATGTTGATTCACATTGCATTGTACCTCAAAGAACAGAAATTGGTAGATGTTGAAGCTGAACTTTGTAATAAGTATAAAGTCTGCCCCAGATTAGATATTAGAGTGTTGCTTGATAAATCTCTTATAAAAATTAATCACCACGGTCAAGTGACATTGCATACCTCTACACAGGAAATGATTAAAGATAAAGCTTCACGTTTTGAGGAGTATGGAAACCAAGAAACGCAATTTGTCTCAAATGATGGAAGCGGGGATTGGGATCCGATGGAATTGGATTGA 1476 0.3848 MQAFSYLVEPFKYHVFLSFRGKDTRFTFTGNLYRALRDRGFCVFMDDQRIDKGEKISQELPKAIEESRIYIIVLSENFASSRYCLVEVVMILDEFAKGKGRWIVPVFFYVDPSVLVRTYEPALANQKKWSSDDKIEEWRTALTKLSKFPGFCVSRDGNIFEYQHIDEIVKEVSRHVLCPIGLDEKIFKVNLLLSSGSDGVRMIGICGEAGIGKITLAHEVFHFNADKVFDHCLLFYDVGGISNQSGILSILHGKRVFIIFQDIKHFKQLEDIRELTKQLGSGSKVIITAQDKHLLDRCGIGFESIYEIKRFSDSEADQFLKFKVLNSATVSPKYVNILNRIKSYALGHPWTLEVICSNLSGKSIEECESALLKYESITDRDIQKILEVSFSALEKCQQQMLIHIALYLKEQKLVDVEAELCNKYKVCPRLDIRVLLDKSLIKINHHGQVTLHTSTQEMIKDKASRFEEYGNQETQFVSNDGSGDWDPMELD* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2265 491 Gene3D - 10 171 IPR035897 -
Gso11g2265 491 SUPERFAMILY "Winged helix" DNA-binding domain 381 453 IPR036390 -
Gso11g2265 491 Pfam NB-ARC domain 244 367 IPR002182 GO:0043531
Gso11g2265 491 SMART till_3 12 148 IPR000157 GO:0007165
Gso11g2265 491 Pfam TIR domain 12 175 IPR000157 GO:0007165
Gso11g2265 491 Gene3D - 172 253 IPR027417 -
Gso11g2265 491 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 150 IPR035897 -
Gso11g2265 491 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 464 - -
Gso11g2265 491 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Gso11g2265 491 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 464 IPR044974 GO:0006952
Gso11g2265 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2265 Gso-Chr11 38449233 38451458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2265 28 464 WRKY Transcription Factor Family AT4G12020 23.591 6.59e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2265 - - gmx:106795499 918.302