Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2263 ATGGCAACCTTCAATCTTTCCGTCGAGCCGAAACCCTTCCGCAATGACGCGTTGATCATCTCCGAGAAAGACACCCGGTGGGGTTTTGGGGGCACTCTCCTCAAAGCTTTTCAACGGCGTGGTTTCCGTGCAGTCTTAGTCGGGGCTGGTCATGAGCTAGGAAGAAAGGAAATTGAAGAATCCATGGTTGTTATTCCTGTCTTCTCCAAGGACCTTGTATCTTCTCCAGATCAGTTGGAGAAACTTGCCACGGTGGTTGATGAGAATAGGACGTGCCATCTGTTTCTGCCTTTTCTTTACAAGCTGGAACTCAAAGATGTGCGATATCTGATGGGTGGAAAACTGTTTGAGAAATTTAACGAGGTTCTGACTAAAGTGACTGATTTGACTGGCTTTCGTTTCGGGGATGGAGTTACATATGAATACCAGTGTGTCGAAAAGATTGTTCAAGTGAGCGCTAAACACGTTGCTTCCACGATTGGAGTAATTCCTCGAGTGACGGAAGTGATGTTGCTTTTGTCTCCCGAATCTGACAATGGAGTCAACGTGGTTGGAGTTGTTGGACCAGGAAAGGAAACAATAACTCGTAAGGTTTATGAGGTAATTGCCCCAAGTTTTCCTGCTCATTGCTTTCTTCCTGATGTGGGAGAAAAAATTAGGGAACATGGGCCGGAATATCTCCAAAACATGCTTGGGCCTTATATGCTTGGAAATTCCCAGGAAGGAGTGCCATTTATAAGGCATGAGAAGGTTCTTGCAGTTTTGGATTGCATTGACTCTCTGGATTCGTTGAAAGCTGCTCTTGGACTTACTCCTCGCTTTGCTCCTGGAAGTCAAGTCTTCATTATAGCTCCAGATATAACTTTGCTTGAAAATAATGGAATTGAAAAGGTATATGAAGTAAAGGGGTTAGACAAGACATCGGCTTATCAAGTGCTTTGCCTAGAGGCTTTCAGTTCCATGAATATGAGTTTCAAATACATGGACATCATAAGCCGTGCTGAAACTTGTGCTGATGGCAATCCTTGTGCTTTGAAAGCTATTGGTTCCAGTTTTAGTGGAAAAACAATAGCGGAATGCGAGATTGCATTAGATGAATATAAAAGAATTCATTATTCTGAATTGATAGAGAGCATGATTGGAGAAAACAATTGGATCCCATCGTTCGGGGATATTTCAGAAGAGTATACGGAGTATGACATGCCAGATGTCGAACTAGCCTCAGATGATGGAAGCGGGATGGGGAATTTTCTGGGATCCTCTACCCTCTTGTCCCAGGCAAACATGCAAGATGTCGAAGCAGCCTAA 1308 0.4381 MATFNLSVEPKPFRNDALIISEKDTRWGFGGTLLKAFQRRGFRAVLVGAGHELGRKEIEESMVVIPVFSKDLVSSPDQLEKLATVVDENRTCHLFLPFLYKLELKDVRYLMGGKLFEKFNEVLTKVTDLTGFRFGDGVTYEYQCVEKIVQVSAKHVASTIGVIPRVTEVMLLLSPESDNGVNVVGVVGPGKETITRKVYEVIAPSFPAHCFLPDVGEKIREHGPEYLQNMLGPYMLGNSQEGVPFIRHEKVLAVLDCIDSLDSLKAALGLTPRFAPGSQVFIIAPDITLLENNGIEKVYEVKGLDKTSAYQVLCLEAFSSMNMSFKYMDIISRAETCADGNPCALKAIGSSFSGKTIAECEIALDEYKRIHYSELIESMIGENNWIPSFGDISEEYTEYDMPDVELASDDGSGMGNFLGSSTLLSQANMQDVEAA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2263 435 Gene3D - 14 161 IPR035897 -
Gso11g2263 435 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 23 375 - -
Gso11g2263 435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 375 IPR044974 GO:0006952
Gso11g2263 435 PRINTS Disease resistance protein signature 180 195 - -
Gso11g2263 435 PRINTS Disease resistance protein signature 245 259 - -
Gso11g2263 435 PRINTS Disease resistance protein signature 338 352 - -
Gso11g2263 435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 376 IPR027417 -
Gso11g2263 435 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 112 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2263 Gso-Chr11 38418767 38428037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2263 160 368 WRKY Transcription Factor Family AT5G45050 27.434 3.12e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2263 - - gmx:100781554 815.068