Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2262 ATGGCAGAAGCATTGGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTTGACAGGTTGGCTTCACGCCAAGTGGTGGACTTCTTTCGCGGAAGAAAGCTCAATGAAAAGCTGCTGAAGAAGCTGAAGGTGAAGCTTCTGTCCATAAATGCTGTGGTTGATGATGCAGAACAAAAGCAGTTTGAGAATTCATATGTGAAAGCATGGCTTGATGAGGTCAAAGATGCTGTGTTTGATGCAGAGGATCTGTTGGATGAAATAGACTTAGAATTCTCCAAATGCGAGTTGGAAGCCGAATCCCGGGCCGGTACTAGAAAGGTACGAAATTTTGACATGGAAATTGAATCAAGGATGAAACAAGTCCTTGATGACTTGGAATTTCTTGTAAGTCAGAAGGGTGATTTAGGTTTGAAAGAGGGCAGTGGTGTTGGTGTGGGATTGGGTAGTAAAGTGTCACAGAAATTGCCATCAACATCTTTGGTGGTTGAAAGTGATATTTATGGCAGAGATGAGGACAAAGAAATGATCTTTAATTGGCTCACATCTGACAATGAATATCATAACCAGCTATCAATACTTTCTGTTGTGGGCATGGGCGGGGTGGGTAAGACTACGCTTGCCCAACATGTATACAATGACCCTAGGATAGAGGGTAAATTTGATATCAAAGCTTGGGTTTGTGTTTCGGATGATTTTGATGTTTTGACAGTAACAAGAGCAATTCTTGAGGCGGTCATTGACTCAACTGATAATAGTAGAGGCCTAGAAATGGTTCATCGACGGTTGAAAGAAAATTTGATAGGCAAGAGATTTCTTCTCGTTTTGGATGACGTTTGGAATGAAAAACGAGAAAAGTGGGAAGCTGTGCAAACTCCTCTTACTTACGGGGCCAGGGGAAGTAGAATTCTTGTCACGACGCGCACTACGAAAGTTGCTTCTACCGTGCGATCAAATAAAGAACTTCACTTGGAGCAATTGCAAGAAGATCATTGCTGGAAAGTTTTTGCTAAGCATGCATTCCAAGATGATAATCCTCGGTTGAATGTTGAGTTGAAGGAGATTGGTATAATGATAGTTGAAAAGTGTAAAGGATTGCCGCTTGCCTTGAAAACAATTGGAAGTCTTTTATACACAAAGGTATCTGCCTCAGAATGGAAAAATGTATTTCTAAGCAAGATATGGGACTTACCCAAAGAAGATAATGAAATTATCCCTGCTTTATTATTGAGCTATCACCACCTTCCTTCTCATCTAAAGAGATGCTTTGCTTATTGTGCCTTGTTCTCCAAAGATCATGAGTTTGACAAGGACGATTTAATTATGTTATGGATGGCTGAAAATTTTCTACAATTCCCTCAACAGAGTAAGCGTCCAGAAGAAGTTGGTGAACAGTACTTTAATGATCTATTGTCGAGATCCTTCTTTCAAGAATCAAGGAGATATGGAAGGCGCTTTATCATGCATGACCTTGTAAATGATTTGGCTAAATATGTTTGTGGGAACATCTGTTTCAGGTTGGAAGTTGAAGAAGAAAAAAGAATACCAAATGCAACTCGTCATTTTTCATTTGTAATCAATCACATTCAATATTTTGATGGGTTTGGGAGTTTATATGATGCTAAAAGGTTACGTACTTTTATGCCAACAAGTGGGAGAGTGGTTTTTCTTAGTGATTGGCATTGTAAGATATCGATACATGAGTTGTTCTGCAAGTTTAGGTTTTTACGTGTGTTATCTTTGTCTCAATGTTCTGGCCTTACTGAGGTGCCCGAGTCTTTAGGCAATCTTAAGCATCTCCATTCATTAGACCTTTCTAGTACTGACATAAAACACCTACCGGATTCAACATGTTTGCTCTATAACTTGCAAACACTGAAGCTTAATTATTGTTACAATTTGGAGGAGCTTCCTTTGAATTTACATAAACTCACCAATTTGCGTTGCCTTGAATTTGTGTTTACTAAAGTGAGAAAGGTACCAATTCATTTGGGAAAACTGAAAAATCTTCAAGTATTGAGTTCGTTTTATGTTGGCAAAAGTAAGGAGTCCAGTATACAGCAACTTGGAGAACTCAATCTTCATAGGAAGCTATCGATTGGGGAGCTGCAAAATATTGTGAATCCATCAGATGCATTAGCAGCAGATTTTAAAAATAAAACACATCTTGTGGAGCTAGAGTTAAATTGGAACTGGAATCCGAACCAGATCCCTGATGATCCAAGGAAAGACAGGGAAGTACTCGAGAATCTACAACCTTCTAAACACTTGGAGAAGTTGTCAATTAAGAACTATGGGGGTACACAATTTCCAAGTTGGTTTTTGAATAATTCATTGTTGAATGTAGTTTCCTTAAGATTGGACTGCTGTAAATATTGCCTATGTTTGCCTCCACTTGGACATTTGCCATTTCTCAAGTGTCTGTTGATTATAGGGCTTGATGGGATAGTGAATATTGATGCTAATTTTTATGGGAGTAGCTCTTCTTCATTTACATCCTTGGAAACATTGCACTTCTCCAACATGAAGGAATGGGAAGAATGGGAATGTAAAGCTGAGACAAGTGTCTTTCCAAACCTTCAACATCTTTCTATAGAGCAATGTCCCAAGCTGATAGGGCATCTACCAGAACAACTTCTTCATTTAAAAACACTATTTATTCATGACTGCAACCAACTTGTGGGTTCTGCTCCTAAGGCTGTAGAAATTTGTGTATTAGATCTACAAGACTGTGGAAAGCTGCAATTTGATTATCATTCGGCTACTTTGGAACAGCTTGTTATTAATGGTCACCACATGGAAGCATCAGCACTAGAAAGTATTGAGCACATCATATCTAATACTTCTCTTGATTCCTTGCGCATTGATTCTTGTCCGAATATGAATATTCCCATGAGCAGTTGCCACAATTTCCTTGGAACTTTGGAGATTGATAGTGGATGTGACTCTATAATTAGTTTTCCTCTAGATTTCTTCCCAAATCTCCGTTCACTTAATCTCAGGTGTTGTCGTAATCTACAAATGATTTCACAGGAGCACACTCATAATCATCTCAAGGATCTGAAAATTGTTGGGTGCCTTCAATTTGAATCATTTCCCAGCAAAGGATTATCTGCACCATTTCTAGAGATCTTTTGTATTGAAGGATTGAAGAATTTGAAATTTTTGTCTGAATGCATGCATATCCTCCTTCCATCTCTTTATAGGCTATCGATACACGATTGTCCACAAGTTGAGTTTATCTTCAATGCAGGTTTGCCATCAAATCTAAATTACATGCATCTCTCAAATTGCTCAAAACTCATTGCTTCACTAATAGGGGCTTTAGGAGCCAACACCTCTCTAGAAACCTTGCATATTGGAAAAGTGGATGTGGAGTCTTTTCCTGATGAGGGGTTGTTGCCACTCTCTCTTACTTCTCTATGGATCTATAAGTGTCCATATCTTAAAAAAATGAACTACAAGGATGTTTGCCACCTCTCCTCTCTCAAGGAATTGATTCTTGAAGACTGTCCCAACCTCCAATGCTTACCAGAGGAGGGTCTACCCAAATTCATTTCAACTCTTATAATTTTGGGCAATTGTCCATTGCTCAAACAGCGTTGCCAGAAACCAGAAGGTGAAGACTGGGGAAAGATTGCTCACATTAAAGATGTGAAGGTTTGGTAA 3672 0.3894 MAEALVGGALLSAFLQVAFDRLASRQVVDFFRGRKLNEKLLKKLKVKLLSINAVVDDAEQKQFENSYVKAWLDEVKDAVFDAEDLLDEIDLEFSKCELEAESRAGTRKVRNFDMEIESRMKQVLDDLEFLVSQKGDLGLKEGSGVGVGLGSKVSQKLPSTSLVVESDIYGRDEDKEMIFNWLTSDNEYHNQLSILSVVGMGGVGKTTLAQHVYNDPRIEGKFDIKAWVCVSDDFDVLTVTRAILEAVIDSTDNSRGLEMVHRRLKENLIGKRFLLVLDDVWNEKREKWEAVQTPLTYGARGSRILVTTRTTKVASTVRSNKELHLEQLQEDHCWKVFAKHAFQDDNPRLNVELKEIGIMIVEKCKGLPLALKTIGSLLYTKVSASEWKNVFLSKIWDLPKEDNEIIPALLLSYHHLPSHLKRCFAYCALFSKDHEFDKDDLIMLWMAENFLQFPQQSKRPEEVGEQYFNDLLSRSFFQESRRYGRRFIMHDLVNDLAKYVCGNICFRLEVEEEKRIPNATRHFSFVINHIQYFDGFGSLYDAKRLRTFMPTSGRVVFLSDWHCKISIHELFCKFRFLRVLSLSQCSGLTEVPESLGNLKHLHSLDLSSTDIKHLPDSTCLLYNLQTLKLNYCYNLEELPLNLHKLTNLRCLEFVFTKVRKVPIHLGKLKNLQVLSSFYVGKSKESSIQQLGELNLHRKLSIGELQNIVNPSDALAADFKNKTHLVELELNWNWNPNQIPDDPRKDREVLENLQPSKHLEKLSIKNYGGTQFPSWFLNNSLLNVVSLRLDCCKYCLCLPPLGHLPFLKCLLIIGLDGIVNIDANFYGSSSSSFTSLETLHFSNMKEWEEWECKAETSVFPNLQHLSIEQCPKLIGHLPEQLLHLKTLFIHDCNQLVGSAPKAVEICVLDLQDCGKLQFDYHSATLEQLVINGHHMEASALESIEHIISNTSLDSLRIDSCPNMNIPMSSCHNFLGTLEIDSGCDSIISFPLDFFPNLRSLNLRCCRNLQMISQEHTHNHLKDLKIVGCLQFESFPSKGLSAPFLEIFCIEGLKNLKFLSECMHILLPSLYRLSIHDCPQVEFIFNAGLPSNLNYMHLSNCSKLIASLIGALGANTSLETLHIGKVDVESFPDEGLLPLSLTSLWIYKCPYLKKMNYKDVCHLSSLKELILEDCPNLQCLPEEGLPKFISTLIILGNCPLLKQRCQKPEGEDWGKIAHIKDVKVW* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2262 1223 Gene3D - 327 411 IPR042197 -
Gso11g2262 1223 Gene3D Ribonuclease Inhibitor 689 877 IPR032675 -
Gso11g2262 1223 Gene3D Ribonuclease Inhibitor 878 1040 IPR032675 -
Gso11g2262 1223 Gene3D Ribonuclease Inhibitor 1041 1208 IPR032675 -
Gso11g2262 1223 Coils Coil 41 61 - -
Gso11g2262 1223 PANTHER DISEASE RESISTANCE PROTEIN RP 14 1033 IPR044974 GO:0006952
Gso11g2262 1223 Pfam Rx N-terminal domain 11 102 IPR041118 -
Gso11g2262 1223 Gene3D - 25 127 - -
Gso11g2262 1223 Pfam NB-ARC domain 172 413 IPR002182 GO:0043531
Gso11g2262 1223 PRINTS Disease resistance protein signature 194 209 - -
Gso11g2262 1223 PRINTS Disease resistance protein signature 267 281 - -
Gso11g2262 1223 PRINTS Disease resistance protein signature 364 378 - -
Gso11g2262 1223 PRINTS Disease resistance protein signature 572 588 - -
Gso11g2262 1223 Gene3D - 151 324 IPR027417 -
Gso11g2262 1223 ProSiteProfiles Leucine-rich repeat profile. 600 621 IPR001611 GO:0005515
Gso11g2262 1223 Gene3D Ribonuclease Inhibitor 538 688 IPR032675 -
Gso11g2262 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 427 IPR027417 -
Gso11g2262 1223 Gene3D - 412 499 IPR036388 -
Gso11g2262 1223 SUPERFAMILY L domain-like 905 1215 - -
Gso11g2262 1223 SUPERFAMILY L domain-like 489 896 - -
Gso11g2262 1223 PANTHER OS05G0414200 PROTEIN 14 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2262 Gso-Chr11 38404179 38409301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2262 195 500 WRKY Transcription Factor Family AT5G45050 25.161 2.10e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2262 - - gmx:100781012 2416.73