Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2241 ATGGCAGAAACATTAGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTTTATTTGACAAGCTTGCTTCACGTCAAGTTCTGAACTTCTTTCATGGAAGAAAATTGGATGAGATGCTGCTGAGCAATTTGAATGTCAAGCTGCTCTCCATTGATGCTCTGGCTGCTGATGCAGAACAAAAGCAGTTCAGAGATCCTCGTGTGAGAGCATGGCTCGTTGATGTCAAAGATGTTGTGCTTGACGCAGAGGATGTTTTGGATGAAATAGACTATGAACTCTCCAAATTTGAAGTGGAAACTGAATTGGAATCTCAATCTCTAACCTGTACTTGCAAGGTACCAAATCTCTTCAACGCGTGTTTCAGTTCATTAAATAAAGGGAAAATTGAGTCAAGGATGAGAGAAGTCCTTCAAAAACTAGAATATCTCTCAAGCCAAAAGGGTGATTTAGGATTAAAAGAAGGTAGTGGTGGTGGGGTTGGATCAGGTAGGAAAATGCCACACAAATTGCCATCAACATCTTTACTGAGTGAAAGTGTTATATATGGTAGAGATGATGACAGAGAAATGGTTATTAATTGGCTGATATCTGACAATGAGAATTGTAATCAGCTATCAATACTTTCTATTGTGGGTATGGGCGGGTTGGGTAAGACCACCCTTGCCCAACATGTATTTAATGACCCAAAGATGGAGGATCAATTTAGTATCCAAGCTTGGGTATGTGTTTCAGATGAACTTGATGTCTTCAAGGTAACAAGAACAATTCTTGAGGCAATCACTAAATCAACTGATGATAGTAGAGACCTAGAAATGGTTCAGGGAAGGTTGAAAGATAAATTGGCAGGAAAGAGATTTCTTCTTGTTTTAGACGACATTTGGAATGAAAATCGAGAGAACTGGGAAGCCGTGCAAACTCCACTTAAATATGGAGCTCAGGGAAGTAGAATTCTTGTCACTACACGCAGTAAGAAAGTTGCTTCCATTATGCGGTCAAATAAAGTACATCACCTAAACCAGTTACAAGAAGATCACTGTTGGCAAGTTTTTGGTAAACATGCATTCCAAGATGATAATAGTCTGTTAAATCCTGAGTTGAAGGAGATTGGTATAAAGATAGTTGAAAAGTGTAAAGGATTGCCTCTAGCCTTGAAAACAATTGGAAGTCTTTTACACACAAAGTCGTCTGTTTCGGAATGGGGAAGTGTATTAACGAGCAAAATATGGGACTTACCAAAAGAAGATAGTGAAATTATTCCTGCTTTGTTATTGAGCTATAACCACCTTCCTTCACATCTCAAGAGATGCTTTGCTTATTGTTCCTTATTCCCCAAAGATTATAAGTTTGACAAGGAGCATTTAATTCTGTTGTGGATGGCTGAAAATTTTCTTCACTGCCTTAACCAGAGTCAGAGTCCAGAAGAAGTTGGTGAACAGTACTTTGATGATCTGCTGTCAAGGTCCTTCTTTCAACAATCAAGCAGATTTCCAACATGTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTGTGGGGACATCTGTTTCAGGTTGGGAGTTGATAGAGCAAAAAGTACACCAAAAACAACCCGTCATTTTTCAGTTGCAATCAATCATGTTCAATATTTTGATGGATTTGGGGCTTCATATGATACTAAAAGGTTACGTACATTTATGCCAACAAGTGGGGGAATGAATTTTCTTTGTGGTTGGCATTGCAACATGTCTATACATGAGTTCTCTAGGTTTAAGTTCTTACACGTCTTATCTTTGTCTTATTGTTCTGGCCTTACAGATGTGCCTGATTCTGTAGATGATCTTAAACATCTTCGTTCATTAGACCTCTCTGGTACCCGCATAAAAAAACTACCTGATTCAATATGTTCTCTCTATAACCTGCAAATACTGAAGGTGGGATTTTGTCGCAATTTGGAGGAGCTTCCATATAATTTGCACAAACTCATCAATTTGCGTCACCTTGAATTTATAGGAACTAAAGTGAGAAAGGTGCCAATGCATTTGGGAAAACTGAAGAATCTTCATGTATGGATGAGTTGGTTTGATGTTGGCAATAGTAGCGAGTTCAGTATTCAGATGCTAGGAGAGCTCAATCTTCATGGAAGTTTATCAATTGGGGAGTTGCAGAATATTGTGAATCCCTCTGATGCATTAGCAGTGAATATGAAAAATAAAATACACCTTGTGGAGCTTGAGTTTGAATGGAATTGGAACTGGAACCCAGAAGATTCAAGGAAAGAAAGGGAAGTACTTGAGAATCTACAACCTTACAAACACTTGGAGAAGTTGTCAATCAGGAACTATGGTGGTACACAATTTCCCAGATGGTTATTTGATAATTCATCATTGAATGTGCTGTCCTTAAAGTTAGATTGCTGTAAATATTGCTCATGTTTGCCTCCCCTTGGACTTTTGCCATCTCTTAAACACCTGACAGTTGCAGGGCTGGATGGGATAGTGGGTATTAATGCTGATTTTTATGGGAGTAGCTCTTCTTCATTTAAATCCTTGGAAACATTGCACTTCTCTGATATGGAGGAATGGGAAGAATGGGAATGTAACTCTGTCACAGGTGCTTTTCCACGTCTTCAACATCTTTCTATAGAGCAATGTCCCAAATTGAAAGGGAATCTACCAGAACAACTTCTTCATTTAAAGAATCTAGTTATATGTGACTGCAAAAAACTCGTGGCTTCTGCTCCCAGGGCTCTACAAATCCGTGAATTAGAACTCCGGGACTGTGGCAATGTGCAATTTGATTATCATCCAAGTACTTTGAAATGGCTGACAATTACAGGACACAACATAGAAGCATCTTCACTCGAAAAGATTGGGCACATCATATCTGATACTTCTCTTGAATTCTTGCACATTTATTATTGCCCAAATATGAAAATTCCCACGAGTCATTGCTATGATTTCCTTGTAACATTGAAGATCAGTGGTGGCTGTGACTCTCTAATAACTTTTCCACTGGATTTCTTCCCAAAACTCAGTTCGCTTGATCTTAGGTGTTGTAATCTAAAAACAATTTCACAGGGGCAGCCTCATAATCATCTCAAGGATCTGAAAATTAGTGGGTGCCCTCAATTTGAGTCATTTCCTAGAGAAGGATTATCTGCACCTTGGCTAGAGAGATTTAGTATTGAAGGGTTGGAGAGCATGAAATCATTGCCAGAACGCATGCATTTCCTTCTTCCATCTCTTACTAGCATATCAATACTTGATTGTCCACAAGTGGAGTCGTTCTCTGATGGAGGTTTTCCATCAAATCTAAAAAAGATGGATCTCTCAAATTGCTCCAAACTTATTGCTTCACTTGAAGGGGCTTTGGGAGCCAACACCTCTCTAGAAACCTTGTCTATTCGAAAAGTGGATGTAGAGTCTTTTCCTGATGAAGGATTGCTTCCACCCTCTCTCACTTCTCTGTGGATCTATAATTGTCCAAATCTTAAAAAATTGGACTACAAGGGTCTTTGCCACCTCTCCTTTCTCGAGATATTGCTTCTTTATTACTGTGGCAGCCTCCAATGCTTACCAGAGGAAGGTCTACCCAAATCCATTTCAACTCTTGAAATTTTTGGCTGTCCGTTGCTCAAACAGCGTTGCCAACAACCAGAAGGTGAAGACCGGGGAAAGATTGCTCACATAAAAAACATAAGGCTTTGGTAA 3699 0.3923 MAETLVGGALLSAFLQVLFDKLASRQVLNFFHGRKLDEMLLSNLNVKLLSIDALAADAEQKQFRDPRVRAWLVDVKDVVLDAEDVLDEIDYELSKFEVETELESQSLTCTCKVPNLFNACFSSLNKGKIESRMREVLQKLEYLSSQKGDLGLKEGSGGGVGSGRKMPHKLPSTSLLSESVIYGRDDDREMVINWLISDNENCNQLSILSIVGMGGLGKTTLAQHVFNDPKMEDQFSIQAWVCVSDELDVFKVTRTILEAITKSTDDSRDLEMVQGRLKDKLAGKRFLLVLDDIWNENRENWEAVQTPLKYGAQGSRILVTTRSKKVASIMRSNKVHHLNQLQEDHCWQVFGKHAFQDDNSLLNPELKEIGIKIVEKCKGLPLALKTIGSLLHTKSSVSEWGSVLTSKIWDLPKEDSEIIPALLLSYNHLPSHLKRCFAYCSLFPKDYKFDKEHLILLWMAENFLHCLNQSQSPEEVGEQYFDDLLSRSFFQQSSRFPTCFVMHDLLNDLAKYVCGDICFRLGVDRAKSTPKTTRHFSVAINHVQYFDGFGASYDTKRLRTFMPTSGGMNFLCGWHCNMSIHEFSRFKFLHVLSLSYCSGLTDVPDSVDDLKHLRSLDLSGTRIKKLPDSICSLYNLQILKVGFCRNLEELPYNLHKLINLRHLEFIGTKVRKVPMHLGKLKNLHVWMSWFDVGNSSEFSIQMLGELNLHGSLSIGELQNIVNPSDALAVNMKNKIHLVELEFEWNWNWNPEDSRKEREVLENLQPYKHLEKLSIRNYGGTQFPRWLFDNSSLNVLSLKLDCCKYCSCLPPLGLLPSLKHLTVAGLDGIVGINADFYGSSSSSFKSLETLHFSDMEEWEEWECNSVTGAFPRLQHLSIEQCPKLKGNLPEQLLHLKNLVICDCKKLVASAPRALQIRELELRDCGNVQFDYHPSTLKWLTITGHNIEASSLEKIGHIISDTSLEFLHIYYCPNMKIPTSHCYDFLVTLKISGGCDSLITFPLDFFPKLSSLDLRCCNLKTISQGQPHNHLKDLKISGCPQFESFPREGLSAPWLERFSIEGLESMKSLPERMHFLLPSLTSISILDCPQVESFSDGGFPSNLKKMDLSNCSKLIASLEGALGANTSLETLSIRKVDVESFPDEGLLPPSLTSLWIYNCPNLKKLDYKGLCHLSFLEILLLYYCGSLQCLPEEGLPKSISTLEIFGCPLLKQRCQQPEGEDRGKIAHIKNIRLW* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2241 1232 Pfam Rx N-terminal domain 11 97 IPR041118 -
Gso11g2241 1232 CDD RX-CC_like 34 89 IPR038005 -
Gso11g2241 1232 Pfam NB-ARC domain 186 426 IPR002182 GO:0043531
Gso11g2241 1232 Gene3D - 425 512 IPR036388 -
Gso11g2241 1232 SMART LRR_typ_2 1004 1027 IPR003591 -
Gso11g2241 1232 SMART LRR_typ_2 610 633 IPR003591 -
Gso11g2241 1232 Gene3D - 164 337 IPR027417 -
Gso11g2241 1232 PANTHER DISEASE RESISTANCE PROTEIN RP 14 1043 IPR044974 GO:0006952
Gso11g2241 1232 PANTHER OS05G0414200 PROTEIN 14 1043 - -
Gso11g2241 1232 Gene3D - 19 130 - -
Gso11g2241 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 440 IPR027417 -
Gso11g2241 1232 SUPERFAMILY L domain-like 914 1217 - -
Gso11g2241 1232 Gene3D Ribonuclease Inhibitor 930 1095 IPR032675 -
Gso11g2241 1232 CDD AAA 187 293 - -
Gso11g2241 1232 ProSiteProfiles Leucine-rich repeat profile. 612 633 IPR001611 GO:0005515
Gso11g2241 1232 SUPERFAMILY L domain-like 501 926 - -
Gso11g2241 1232 Gene3D Ribonuclease Inhibitor 570 929 IPR032675 -
Gso11g2241 1232 Gene3D - 340 424 IPR042197 -
Gso11g2241 1232 PRINTS Disease resistance protein signature 207 222 - -
Gso11g2241 1232 PRINTS Disease resistance protein signature 280 294 - -
Gso11g2241 1232 PRINTS Disease resistance protein signature 377 391 - -
Gso11g2241 1232 PRINTS Disease resistance protein signature 608 624 - -
Gso11g2241 1232 Gene3D Ribonuclease Inhibitor 1096 1217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2241 Gso-Chr11 38177984 38184328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2241 208 443 WRKY Transcription Factor Family AT5G45050 27.500 7.80e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2241 - - gmx:100777280 2456.02