Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2234 ATGGCACTAGAATTGGTAGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCGTTTGAGAAGCTTGCTTCTCCTCAAGTTCTGGACTTCTTTCGTGGAAGAAAGCTAGATCAAAAGCTGCTCAACAACTTGGAAATCAAGCTGAACTCCATACAGGCTCTGGCTGATGATGCAGAACTAAAGCAGTTCAGAGATCCACCTGTCAGGAACTGGCTTCTTAAGGTCAAAGATGCTTTGTTTGACGCAGAGGATCTCTTGGATGAAATACAACATGAGATCTCCAAATGCCAGGTCGAAGCTGAAGCTGAAGCTGAGTCTCAAACCTGCACTTGCAAGGTACCAAATTTCTTCAAATCTTCTCCTGTTGGTTCCTTTAACAAGGAAATTAAATCAAGGATGGAACAGGTCCTTGAGGACCTTGAAAACCTTGCTAGCCAAAGTGGCTATCTAGGTTTGCAAAATGCAAGTGGTGTTGGATCAGGATTTGGTGGTGCAGTATCACTGCATTCAGAATCAACATCTTTGGTTGTTGAAAGTGTTATTTATGGCAGAGATGATGACAAAGAAATGATCTTTAATTGGCTCACATCTGACATTGACAATTGTAACAAACTATCAATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCAAACTTGCCCAACATGTATTCAATGACCCAAGGATAGAAAATAAATTTGATATCAAAGCTTGGGTCTGTGTTTCAGATGAATTTGATGTTTTCAATGTAACAAGAACAATTCTGGAGGCAGTCACTAAATCAACTGATGATAGTAGAAACCGAGAAACGGTTCAGGGAAGGTTGAGAGAAAAATTGACAGGAAATAAATTTTTTCTTGTTTTGGATGATGTTTGGAACAGAAATCAAAAGGAATGGAAAGATTTGCAAACTCCTCTTAATTATGGGGCTTCAGGGAGTAAAATTGTTGTCACTACACGTGACAAGAAAGTTGCTTCAATAGTGGGATCAAATAAAACACATTGCTTAGAGCTGTTGCAAGATGATCATTGCTGGCGATTGTTCACTAAACATGCATTCCGAGATGATAGTCATCAACCAAATCCAGACTTCAAGGAGATTGGTACGAAGATAGTAGAAAAATGTAAAGGACTGCCTCTGGCCTTGACAACAATTGGAAGTCTATTACACCAAAAATCATCTATTTCAGAATGGGAAGGCATATTGAAAAGCGAGATATGGGAATTTTCAGAAGAGGATAGCTCTATTGTCCCTGCTTTAGCACTAAGCTATCACCACCTTCCTTCCCATCTCAAGAGATGTTTTGCTTATTGCGCCTTATTCCCCAAAGATTACAGGTTTGACAAGGAGGGTTTAATTCAGCTGTGGATGGCGGAAAACTTTTTACAATGTCATCAACAGAGTAGGAGTCCAGAAAAAGTGGGTGAACAATACTTCAACGATCTTTTGTCAAGGTCCTTCTTTCAACAATCAAGCACCGTAGAGAGAACACCTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTGTGGGGACATCTGCTTCAGGTTGGAAAATGATCAAGCAACAAATATACCGAAGACAACCCGTCATTTTTCAGTTGCAAGCGATCACGTTACATGCTTTGATGGGTTTCGAACTTTATACAATGCTGAAAGGTTACGCACATTTATGTCATTAAGTGAGGAAATGAGTTTTCGTAACTACAATCGTTGGTATTGCAAGATGTCAACACGTGAATTATTTTCCAAGTTTAAGTTCTTACGTGTCTTATCTCTGTCTGGTTATTCTAACCTAACAAAGGTGCCTAACTCTGTGGGTAATCTTAAATATCTCAGTTCGTTAGACTTATCCAATACTGAAATAGTAAAACTACCTGAATCAACATGTTCACTCTACAACTTGCAAATACTGAAGCTGAATTATTGTGAAGATTTGAAGGAGCTGCCCTCAAATTTGCATAAACTCACTAATTTGCATCGCCTTGAATTAATAGATACTGGAGTGAGAAAGGTACCAGCACATTTGGGAAAACTGAAGTATCTTCAAGTATTAATGAGTTCGTTTAATGTTGGCAAAAGTAGGGAGTTCAGTATCCAGCTGCTAGGAGAACTCAATCTTCATGGAAGTCTATCAATAAGGCAACTGCAGAATGTTGAGAATCCATCAGATGCATTAGCGGTGGATTTAAAAAATAAAACACACCTTGTCGAGCTAGAGTTAGAATGGGATTCAGACTGGAACCCTGATGATTCAACAAAAGAAAGGGATGTAATCGAGAATCTACAGCCTTCCAAACACTTGAAGAAGTTGACGATGAGGAACTACAGGGGTAAACAATTTCCTAGTTGGTTATTGGATAATTCATCATGTAATGTGGTGTCCTTAAGCTTGAATAACTGTAAAGGTTGCCTATGTTTGCCTCCCCTTGGACGTTTGCCATCTCTGAAGGAGCTTTCAATTGAAGGGCTTGATGGGATTGTGAGTATTAATGCTGATTTTTTCGGGAGTAGCTCTTGTTCATTTACATCCTTGGAATCTTTGGAGTTCTCCGATATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTGCTTTTCCACGTCTTCAACGTCTTTCTATAATGCGTTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGTCATTTAAATTATCTAAAGATTTCTGGGTGCGAACAACTTGTACCTTCTGCTCTCAGTGCCCCTGATATTCATAAATTAGACCTGGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAAGAGCTTACCATTGAAGGTCACAACGTGGAGGCAGCCTTACTCGAACAGATTGGGCGCAATTACTCTTGTTCAAATAACAATATTCCCATGCACAGTTCCTATGATTTCCTTGTAACCTTGCACATCAATGGTGGCTGTGACTCTCTAACGACCATTCCGCTAGATATCTTCCCAATACTCAAGAAGCTTGATCTCAGGAAGTGTCGTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCAGGATCTGTATGTCGGAGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTGATTATCTGTGGATAAAGGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAAAGTATGGCTCTCTATGGTGGTAGTTACAAACTTATCTACTTATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTAGAAACCTTATATATTGGAGAAGTGGATGTTGAGCGTCTTCCTGAGGAAGGTGTACTGCCACACTCTCTCAAGATATTGCTTCTTAAAGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAGCTTTGTGGATTTGGGGGGACTGTCCGTTGCTCAAACAACGTTGCCGGGAACCCGAAGGCGAAGACTGGCCAAAGATTGCTCACTTTTGCCCGTTGCTCAATCAACGTTGCCGGGAACCCGGAGGCGAAGACTGGCCAAAGATTGCTGACATTGAAAACGTGTATATAATATAA 3603 0.4088 MALELVGGALLSAFLQVAFEKLASPQVLDFFRGRKLDQKLLNNLEIKLNSIQALADDAELKQFRDPPVRNWLLKVKDALFDAEDLLDEIQHEISKCQVEAEAEAESQTCTCKVPNFFKSSPVGSFNKEIKSRMEQVLEDLENLASQSGYLGLQNASGVGSGFGGAVSLHSESTSLVVESVIYGRDDDKEMIFNWLTSDIDNCNKLSILSIVGMGGLGKTKLAQHVFNDPRIENKFDIKAWVCVSDEFDVFNVTRTILEAVTKSTDDSRNRETVQGRLREKLTGNKFFLVLDDVWNRNQKEWKDLQTPLNYGASGSKIVVTTRDKKVASIVGSNKTHCLELLQDDHCWRLFTKHAFRDDSHQPNPDFKEIGTKIVEKCKGLPLALTTIGSLLHQKSSISEWEGILKSEIWEFSEEDSSIVPALALSYHHLPSHLKRCFAYCALFPKDYRFDKEGLIQLWMAENFLQCHQQSRSPEKVGEQYFNDLLSRSFFQQSSTVERTPFVMHDLLNDLAKYVCGDICFRLENDQATNIPKTTRHFSVASDHVTCFDGFRTLYNAERLRTFMSLSEEMSFRNYNRWYCKMSTRELFSKFKFLRVLSLSGYSNLTKVPNSVGNLKYLSSLDLSNTEIVKLPESTCSLYNLQILKLNYCEDLKELPSNLHKLTNLHRLELIDTGVRKVPAHLGKLKYLQVLMSSFNVGKSREFSIQLLGELNLHGSLSIRQLQNVENPSDALAVDLKNKTHLVELELEWDSDWNPDDSTKERDVIENLQPSKHLKKLTMRNYRGKQFPSWLLDNSSCNVVSLSLNNCKGCLCLPPLGRLPSLKELSIEGLDGIVSINADFFGSSSCSFTSLESLEFSDMKEWEEWECKGVTGAFPRLQRLSIMRCPKLKGHLPEQLCHLNYLKISGCEQLVPSALSAPDIHKLDLGDCGKLQIDHPTTLKELTIEGHNVEAALLEQIGRNYSCSNNNIPMHSSYDFLVTLHINGGCDSLTTIPLDIFPILKKLDLRKCRNLQRISQGQAHNHLQDLYVGECPQLESLPEGMHVLLPSLDYLWIKDCPKVEMFPEGGLPSNLKSMALYGGSYKLIYLLKSALGGNHSLETLYIGEVDVERLPEEGVLPHSLKILLLKDCPRLQCLPEEGLPKSISALWIWGDCPLLKQRCREPEGEDWPKIAHFCPLLNQRCREPGGEDWPKIADIENVYII* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2234 1200 Gene3D Ribonuclease Inhibitor 959 1162 IPR032675 -
Gso11g2234 1200 Gene3D - 341 424 IPR042197 -
Gso11g2234 1200 Coils Coil 41 61 - -
Gso11g2234 1200 PANTHER OS05G0414200 PROTEIN 13 1039 - -
Gso11g2234 1200 Coils Coil 126 146 - -
Gso11g2234 1200 Gene3D - 33 136 - -
Gso11g2234 1200 Gene3D - 167 340 IPR027417 -
Gso11g2234 1200 PRINTS Disease resistance protein signature 207 222 - -
Gso11g2234 1200 PRINTS Disease resistance protein signature 280 294 - -
Gso11g2234 1200 PRINTS Disease resistance protein signature 377 391 - -
Gso11g2234 1200 PRINTS Disease resistance protein signature 612 628 - -
Gso11g2234 1200 SUPERFAMILY L domain-like 502 909 - -
Gso11g2234 1200 Gene3D Ribonuclease Inhibitor 554 958 IPR032675 -
Gso11g2234 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 13 1039 IPR044974 GO:0006952
Gso11g2234 1200 SUPERFAMILY RNI-like 872 1149 - -
Gso11g2234 1200 Gene3D - 425 513 IPR036388 -
Gso11g2234 1200 Pfam Rx N-terminal domain 11 103 IPR041118 -
Gso11g2234 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 440 IPR027417 -
Gso11g2234 1200 Pfam NB-ARC domain 185 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2234 Gso-Chr11 38052241 38056195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2234 208 401 WRKY Transcription Factor Family AT5G45050 27.273 2.15e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2234 - - gmx:100818432 1954.87