Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2232 ATGGCACTAGAATTGGTGGGTGGTGCTCTTCTTTCTGCTTTACTTCAGGTTGCATTTGAGAAGCTTGCTTCTCTTCAAGTTCGGGACTTCTTTCGTGGAAGAAAGCTTGATCAAAAGCTGCTCAACAACTTGGAAATCAAGCTGAACTCCATACAGGCTCTGGCTGATGATGCAGAACTAAAGCAGTTCAGAGATCCACGTGTCAGGAACTGGCTTCTTAAGGTCAAAGATGCTGTGTTTGACTCAGAGGATCTCTTGGATGAAATACAACATGAGATCTCCAAATGCCAGGTCGAAGCTGAAGCTGAAGCTGAAGCTGAGTCTCAAACCTGCACTTGCAAGGTACCAAATTTCTTCAAATCTTCTCCTGTTAGTTCCTTTAACAAGGAAATTAAATCAAGGATGGAACAGGTCCTTGAGGACCTTGAAAACCTTGCTAGCCAAAGTGGCTATCTAGGTTTGAAAAATGCAAGTGGTGTTGGATCAGGATTTGGTGGTGCAGTATCACAGCAATCACAATCAACATCTTTGCTTGTTGAAAGTGTTATTTATGGCAGAGATGATGACAAAGAAATGATCTTTAATTGGCTCACATCTGACATTGACAATTGTAACAAACTATCAATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCACACTTGCCCAACATGTATACAATGACCCAAGGATAGAAAATAAATTTGATATCAAAGCTTGGGTCTGTGTTTCAGAGGAATTTGATGTTTTCAATGTAACAAGAACAATTCTTGAGGCAGTCACTAAATCAACTGATGATAGTAGAAACCGAGAAATGGTTCAGGGAAGGTTGAGCAAAAAATTGACAGGAAAGAGATTTTTTCTTGTTTTGGATGATGTTTGGAACAGAAAACAAAAGGAATGGAAAGATTTGCAAAGTCCTCTTAATGGTGGGGCTCCAGGGAGTAAAATTGTTGTCACTACACGTGACAAGAAAGTTGCTTCAATAGTGGGATCAAATAAAACACATTCCTTAGAGATGTTGCAAGATGATCATTGCTGGCGATTGTTCGCTAAACATGCATTCCAAGATGATAGTCATCAACCGAATCCAGACTTCAAGGAGATTGGTACGAAGATAGTAGAAAAATGTAAAGGACTGCCTCTGGCCTTGACAACAATTGGAAGTCTATTACACCAAAAATCATCTATTCCAGAATGGGAAGGCATATTGAAAAGCGAGATATGGGAATTTTCAGAAGAGGATAGCTATATTGTCCCAGCTTTGGCACTAAGCTATCACCACCTTCCTTCCCATCTCAAGAGATGTTTTGCTTATTGTGCCTTATTCCCCAAAGATTACAGGTTTCACAAGGAGGGTTTAATTCAGCTGTGGATGGCGGAAAACTTTTTACAATGTCATCAACAGAGTAGGAGTCCAGAAGAAGTCGGTGAACAATACTTCAACGATCTTTTGTCAAGGTCCTTCTTTCAACAATCAAGTAGCATAAAGAAAACATATTTTGTCATGCATGACCTTCTCAACGATTTGGCAAAATATGTTTGTGGGGACATCTGTTTCAGGTTGGAAGAAGATCAAGCAAAAAATATACCAAAAACAACCCGTCATTTTTCAGTTGCAACCTATCAGGTTAAATGCTTTGAAGGGTTTGGAACTTTATACGATGCTGAAAGGTTACGCACATTTATGTCATCAAGTGAGAAAATGAAGATTCATAACTACCATCGTTGGCATTGCAAGATGTCAACACATGAATTGTTCTCCGAGTTTAAGTTCTTACGTGTCTTATCTCTGTCTGGTTATTCTAACCTAACAGAGTTGCCTGACTCTGTAGGTAATCTTAAATATCTCCATTCATTAGACCTCTCAAATACTGACATTGAAAAATTACCTGAATCAACATGTTCACTCTACAACTTGCAAATACTGAAGCTAAATGGTTGTACACATTTGAAGGAGCTGCCCTCCAATTTGCATAAACTCACTGATTTGCATCGCCTTGAATTAATAGATACTGGAGTGAGAAAGGTACCGGCACATTTGGGAAAACTGAAGTATCTTCAAGTATTAATGAGTTCGTTTAAGGTTGGCAAAAGTAGGGAGCTCAGTATCCAGCAGCTAGGAGAACTCAATCTTCATGGAAGTCTATCAATAAGGAAACTGCAGAATGTTGAGAATCCCTCAGATGCATTAGCCTTGGATTTAAAAAATAAAACACACCTTGTTGAGGTAGAGTTGAAATGGGATTCAGACTGGAACCCTGATGATTCAACAAAAGAAAGGGATGAAATTGTAATCGAGAATCTACAGCCTTCCAAACACTTGGAGAAGTTGACGATGAGGCATTATGGGGGTAAACAATTTCCAAGGTGGTTATTCAACAATTCCTTATTGAATGTGGTGTCCTTAACCTTCGAGAACTGTGAATCTTGCCAACGTTTGCCTCCCCTTGGACTCTTGCCATGTCTCAACTACCTGAGTATTGTTGGACTTAATGGGATATTGCGTATTGATGCTGAATTTCATGGGAATAGCTCTTGTTCATTTGCATCCTTGGAAACACTGGAGTTCTCCCGGATGAAAGAATGGGTAAAATGGGAATGTCAGGATGTGACAGGTGCTTTTCCACGTCTTAAAGATCTCAGGATATCTAATTGTCCCAAGCTGAAAGGGGACCTGCCAGAGCAACTTGTTTGTTTACAGACACTAACAATTTCGAACTGCAAACAGCTTATGGCTTCTGCTCCCATGGCTCCAGAGATTCGTGTATTGGATTTAAATGACTGTGGAAAGCTGCAACTTGATGATCATCGGACTACTTTGAAAATGCTTAGTGTCGGCGGACAAAGCATGGATACATCGTTGATGGAAAGTATTTGGCACATCATATCTGTTAGTTCTCTTGAAGAGCTGAGGGTTGATTATTGCCCAAATATGAATATTCCAATGAGTAGTTTTCAGGGTTTCCTTGTAAGCTTGCACATCTTAGGTGGCTGCAACTCTCTAACGACCATTCCGCTAGATTTGTTCCCAATACTCAGAGAGCTTTATACCTGGTGGTGTCCTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCACTATCTGAGTATGAGAGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTCATTATCTGGGCATAGAGGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAAGAAATGAGTCTTGGTAGTTCCAAACTTATGTCCTTATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTAGAAAGCTTATATATTGGAGAAGTGGATGTTGAGTGTCTTCCTGACGAAGGTGTACTGCCACACTCTCTTGTTTCTCTAGGGATCAATAAGTGTGGAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCTCTCCTCTCTCAAGGAATTGCGTCTTGAAGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCATATTTGCGAATTTGGGGGGAGTGTCCGTTGCTCAAACAACGTTGCAGGAAACCCGAAGGTGAAGACTGGCCAAAGATTGCTCACATTGAACACTTCTACATATAA 3651 0.4076 MALELVGGALLSALLQVAFEKLASLQVRDFFRGRKLDQKLLNNLEIKLNSIQALADDAELKQFRDPRVRNWLLKVKDAVFDSEDLLDEIQHEISKCQVEAEAEAEAESQTCTCKVPNFFKSSPVSSFNKEIKSRMEQVLEDLENLASQSGYLGLKNASGVGSGFGGAVSQQSQSTSLLVESVIYGRDDDKEMIFNWLTSDIDNCNKLSILSIVGMGGLGKTTLAQHVYNDPRIENKFDIKAWVCVSEEFDVFNVTRTILEAVTKSTDDSRNREMVQGRLSKKLTGKRFFLVLDDVWNRKQKEWKDLQSPLNGGAPGSKIVVTTRDKKVASIVGSNKTHSLEMLQDDHCWRLFAKHAFQDDSHQPNPDFKEIGTKIVEKCKGLPLALTTIGSLLHQKSSIPEWEGILKSEIWEFSEEDSYIVPALALSYHHLPSHLKRCFAYCALFPKDYRFHKEGLIQLWMAENFLQCHQQSRSPEEVGEQYFNDLLSRSFFQQSSSIKKTYFVMHDLLNDLAKYVCGDICFRLEEDQAKNIPKTTRHFSVATYQVKCFEGFGTLYDAERLRTFMSSSEKMKIHNYHRWHCKMSTHELFSEFKFLRVLSLSGYSNLTELPDSVGNLKYLHSLDLSNTDIEKLPESTCSLYNLQILKLNGCTHLKELPSNLHKLTDLHRLELIDTGVRKVPAHLGKLKYLQVLMSSFKVGKSRELSIQQLGELNLHGSLSIRKLQNVENPSDALALDLKNKTHLVEVELKWDSDWNPDDSTKERDEIVIENLQPSKHLEKLTMRHYGGKQFPRWLFNNSLLNVVSLTFENCESCQRLPPLGLLPCLNYLSIVGLNGILRIDAEFHGNSSCSFASLETLEFSRMKEWVKWECQDVTGAFPRLKDLRISNCPKLKGDLPEQLVCLQTLTISNCKQLMASAPMAPEIRVLDLNDCGKLQLDDHRTTLKMLSVGGQSMDTSLMESIWHIISVSSLEELRVDYCPNMNIPMSSFQGFLVSLHILGGCNSLTTIPLDLFPILRELYTWWCPNLQRISQGQAHNHLHYLSMRECPQLESLPEGMHVLLPSLHYLGIEDCPKVEMFPEGGLPSNLKEMSLGSSKLMSLLKSALGGNHSLESLYIGEVDVECLPDEGVLPHSLVSLGINKCGDLKRLDYKGLCHLSSLKELRLEDCPRLQCLPEEGLPKSISYLRIWGECPLLKQRCRKPEGEDWPKIAHIEHFYI* 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2232 1216 Pfam NB-ARC domain 187 428 IPR002182 GO:0043531
Gso11g2232 1216 Coils Coil 41 61 - -
Gso11g2232 1216 Gene3D Ribonuclease Inhibitor 1035 1201 IPR032675 -
Gso11g2232 1216 Gene3D - 427 515 IPR036388 -
Gso11g2232 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 442 IPR027417 -
Gso11g2232 1216 SUPERFAMILY L domain-like 504 929 - -
Gso11g2232 1216 Gene3D - 167 340 IPR027417 -
Gso11g2232 1216 Gene3D - 15 136 - -
Gso11g2232 1216 PRINTS Disease resistance protein signature 209 224 - -
Gso11g2232 1216 PRINTS Disease resistance protein signature 282 296 - -
Gso11g2232 1216 PRINTS Disease resistance protein signature 379 393 - -
Gso11g2232 1216 PRINTS Disease resistance protein signature 897 913 - -
Gso11g2232 1216 Pfam Rx N-terminal domain 14 104 IPR041118 -
Gso11g2232 1216 Coils Coil 128 148 - -
Gso11g2232 1216 SUPERFAMILY L domain-like 922 1209 - -
Gso11g2232 1216 PANTHER DISEASE RESISTANCE PROTEIN RP 15 1055 IPR044974 GO:0006952
Gso11g2232 1216 Gene3D - 342 426 IPR042197 -
Gso11g2232 1216 Gene3D Ribonuclease Inhibitor 555 937 IPR032675 -
Gso11g2232 1216 PANTHER OS05G0414200 PROTEIN 15 1055 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2232 Gso-Chr11 38027037 38031797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2232 210 445 WRKY Transcription Factor Family AT5G45050 27.801 3.43e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2232 - - gmx:100818432 1929.07