Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2220 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTGACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCTTGGAAGAAAGCTCGATGGGAGGCTGCTGAAAAAGTTGAAGAGGAAGCTGGTGTCCGTCAATGCTGTGGTTGATGATGCAGAACAAAAGCAGTTCACTGATGCATATGTGAAAGCATGGCTTGATGACGTCAGAGACGTGTTGCTTGATACCGAGGATCTGTTGGATGAAATAGACTGCGAATTCTCCAAAACTGAGTTGGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAAGGATCATAGATGTCCTTGATGACCTAGATTCTCTTTTAGACCAAAAGAATGATCTAGGTTTGAAAAATGTTAGTGATGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTCACAGAAATTGTCATCCACATCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATTATGACAAAGATATGATCCTTAATTGGCTGACTTCTGACACTGACAATCATAACAAGATATCAATACTTTCGATTGTGGGAATGGGTGGGATGGGTAAGACCACGCTTGCCCAACATGTATATAACAACCCAAGGATACAGGAGGCTAAATTTGACATCAAAGTCTGGGTCTGTGTTTCGGATGATTTTGATGTTTTGATGTTAACCAAGACAATTCTTAACAAAATCACTAAATCAAAAGAAGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAAAAGTTGTCGGGGAATAAATATCTTCTCGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCTCTTAAATACGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAAGGTTGCTTCAATCATGCAGTCAAACAAAGTACATGAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTATCCTAAGTTGAATGAGCAGCTGAAGGAGATTGGTATAAAGATAGTTGAGAAGTGCCAAGGGTTGCCTCTAGCCTTAGAAACAGTTGGATGTCTTTTACACACAAAACCATCTGTTTCACAATGGGAAGGTGTATTGAAAAGCAAGATATGGGAGTTACCGAAAGAAGACAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCCTTATTCCCTAAAGATCACGAGTTTTACAAGGATAGCTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATGCTCTCAAGAGAGTACTCCTCAAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACGATCAAGTAGAGAAAAGTGTTTTGTCATGCATGATCTTCTCAATGATTTGGCAAAATATGTTTGTGGGGACATCTGTTTCAGATTAGGAGTTGATAAAACAAAAAGTATATCAAAAGTCCGTCATTTTTCATTTGTACCTGAATACCATCAATATTTTGATGGGTACGGGAGTTTATATCATGCTAAAAGGCTACGGACATTTATGCCCACACTTCCAGGACGAGATATGTATATTTGGGGTGGTAGGAAACTAGTAGATGAGTTGTGCTCCAAGTTTAAGTTCTTACGCATCTTATCTTTGTTTCGTTGTGATCTTATAGAGATGCCTGACTCTGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTCTAAAACTTACATAAAAGAACTGCCTGATTCAATTTGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATTCTTGTGACCATTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGCTGTCTTGAATTTATGTACACTAAAGTGAGAAAGATGCCAATGCATTTTGGAAAACTGAAGAATCTTCAGGTGTTGAGTTCGTTTTATGTTGGAATGGGCAGCGACAACTGCAGTATTCAACAGCTAGGGGAACTCAATCTTCATGGAAGGCTATCAATTGAGGAGCTGCAAAATATTGTGAATCCCTTGGATGCATTGGCCGCAGATTTGAAAAATAAAACTCATCTTCTGGATCTAGAGTTAAAATGGAATGAGCACCAGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTTGAGAATCTGCAACCTTCAAGACATTTGGAGAAATTGTCAATCGGGAACTACGGTGGTACTCAATTTCCTAGTTGGTTATTGGATAATTCATTATGTAATGTGGTGTGGTTAAGCTTGAAGAACTGTAAATATTGCCTATGTTTGCCTCCCCTTGGACTTTTGCCACTTCTGAAGGAGCTTTTAATTGGAGGGCTTGATGGGATTGTGAGTATTAATGCTGATTTTTACGGTAGTAGCTCTTGTTCATTTACATCCTTGGAATCTTTGGAGTTCTACGATATGAAGGAATGGGAAGAATGGGAATGTATGACAGGTGCTTTTCCACGTCTTCAACGTCTTTATATAGAGGATTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGTCAATTAAATGATCTAAAGATTTCTGGGTGCGAACAACTTGTACCTTCTGCTCTCAGTGCCCCTGATATTCATCAATTATTCCTAGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAAGTGCTTACCATTGAAGGTTACAACGTGGAGGCAGCTTTACTCGAACAGATTGGACACAATTACGCTTGTTCAAATAAGAATATTCCCATGCACAGTTGCTATGATTTCCTTGTAAAGTTGGAAATCATAGGTGGCTGCGACTCTCTAACGACCATTCACTTAGATATCTTCCCAATACTCGGGGTCCTTTATATCAGGAAGTGTCCTAATCTACAGAGGATTTCACAGGGGCACGCTCATAATCATCTCGAGACTCTGAGTATCATAGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTGATTCTCTGTGGATAATTCATTGTCCAAAAGTTCAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAAAATATGCGTCTCTATGGTAGTTCCAAACTTATCTCCTTATTGAAAAGTGCCTTGGGAGACAATCACTCTCTAGAAAGATTATCTATTGGAAAAGTGGATGTTGAGTGTCTTCCTGAGGAAGGTGTACTGCCACACTCTCTTGTTACTCTAGACATCAGTCATTGTGAAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCTCTCCTCTCTCAAGAAATTGCATCTTTCTGACTGCCCCAGGCTCCAATGCTTACCGGAGGAGGGTCTGCCCAAATCCATTTCAACTTTGAGCATTTACAATTGTCCGTTGCTCAAACAACGTTGCCGGGAACCCAAAGGCGAAGACTGGCCAAAGATTGCTCACATTAAACGCGTGTCGTTACACGATTGA 3546 0.4024 MPVLETLGGALFGAVLQVLFDKLDSHQVLDYFLGRKLDGRLLKKLKRKLVSVNAVVDDAEQKQFTDAYVKAWLDDVRDVLLDTEDLLDEIDCEFSKTELEAESQTSASKVCDFESRIIDVLDDLDSLLDQKNDLGLKNVSDVGVGSGSGSKVSQKLSSTSLVVESVIYGRDYDKDMILNWLTSDTDNHNKISILSIVGMGGMGKTTLAQHVYNNPRIQEAKFDIKVWVCVSDDFDVLMLTKTILNKITKSKEDSGDDLEMVHGRLKEKLSGNKYLLVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNKVASIMQSNKVHELKQLQEDHSWQVFAQHAFQDDYPKLNEQLKEIGIKIVEKCQGLPLALETVGCLLHTKPSVSQWEGVLKSKIWELPKEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHEFYKDSLIQLWVAENFVQCSQESTPQEEIGEQYFNDLLSRSFFQRSSREKCFVMHDLLNDLAKYVCGDICFRLGVDKTKSISKVRHFSFVPEYHQYFDGYGSLYHAKRLRTFMPTLPGRDMYIWGGRKLVDELCSKFKFLRILSLFRCDLIEMPDSVGNLKHLRSLDLSKTYIKELPDSICFLCNLQVLKLNSCDHLEELPSNLHKLTNLRCLEFMYTKVRKMPMHFGKLKNLQVLSSFYVGMGSDNCSIQQLGELNLHGRLSIEELQNIVNPLDALAADLKNKTHLLDLELKWNEHQNLDDSIKERQVLENLQPSRHLEKLSIGNYGGTQFPSWLLDNSLCNVVWLSLKNCKYCLCLPPLGLLPLLKELLIGGLDGIVSINADFYGSSSCSFTSLESLEFYDMKEWEEWECMTGAFPRLQRLYIEDCPKLKGHLPEQLCQLNDLKISGCEQLVPSALSAPDIHQLFLGDCGKLQIDHPTTLKVLTIEGYNVEAALLEQIGHNYACSNKNIPMHSCYDFLVKLEIIGGCDSLTTIHLDIFPILGVLYIRKCPNLQRISQGHAHNHLETLSIIECPQLESLPEGMHVLLPSLDSLWIIHCPKVQMFPEGGLPSNLKNMRLYGSSKLISLLKSALGDNHSLERLSIGKVDVECLPEEGVLPHSLVTLDISHCEDLKRLDYKGLCHLSSLKKLHLSDCPRLQCLPEEGLPKSISTLSIYNCPLLKQRCREPKGEDWPKIAHIKRVSLHD* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2220 1181 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2220 1181 PRINTS Disease resistance protein signature 268 282 - -
Gso11g2220 1181 PRINTS Disease resistance protein signature 365 379 - -
Gso11g2220 1181 PRINTS Disease resistance protein signature 593 609 - -
Gso11g2220 1181 Pfam Rx N-terminal domain 13 103 IPR041118 -
Gso11g2220 1181 Gene3D Ribonuclease Inhibitor 956 1179 IPR032675 -
Gso11g2220 1181 SUPERFAMILY L domain-like 488 885 - -
Gso11g2220 1181 Pfam NB-ARC domain 171 414 IPR002182 GO:0043531
Gso11g2220 1181 Gene3D - 328 412 IPR042197 -
Gso11g2220 1181 Gene3D - 148 325 IPR027417 -
Gso11g2220 1181 Gene3D - 413 499 IPR036388 -
Gso11g2220 1181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Gso11g2220 1181 SUPERFAMILY L domain-like 944 1172 - -
Gso11g2220 1181 Gene3D Ribonuclease Inhibitor 559 940 IPR032675 -
Gso11g2220 1181 PANTHER OS05G0414200 PROTEIN 27 1018 - -
Gso11g2220 1181 Coils Coil 42 62 - -
Gso11g2220 1181 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1018 IPR044974 GO:0006952
Gso11g2220 1181 Gene3D - 16 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2220 Gso-Chr11 37884476 37889210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2220 191 431 WRKY Transcription Factor Family AT5G45050 27.165 1.57e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2220 - - gmx:100804921 2239.15