Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2190 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTAACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCGTGGAAGAAAGCTCAATGAGAAGCTGCTGAAAAAGTTGAAGAGGAACCTGGTGTCTGTCAAAGCTCTGGTTGATGATGCAGAACAAAAGCAGTTCACTGATGCATCTGTGAAAGCATGGCTTGATGACGTCAGAGACGTGTTGCTTGATACCGAGGATCTGTTGGAGGAAATAGACTACGAATTCTCCAAAACTGAGTCAGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAAGGATCAAAGATGTCCTTGATGATCTAGATTCTCTTTTAGACCAAAAGGATGATCTAGGTTTGAAAAATGTTAGTGGTGTTGGGGTTGGATCAGGATCGGGTAGCAAAGTGTCACTGAAATTGCCATCCACATCTTTGGTGGTTGAAAGTGTTTTTTATGGCAGAGATGATGACAAAGATATGATCCTTAATTGGCTGACTTCTGACACAGATAATCATAACAAGATATCAATATTTGCGATTGTGGGGATGGGTGGGATGGGTAAGACCACGCTTGCCCAACATGTATATAACAACCCAAGGATGGAGGAGGAGGTTAAATTTGACATCAAAGTCTGGGTCTGTGTTTCGGATGATTTTGATGTTTTGATGTTAAGCAAAACAATTCTGAACAAAATCACTAAATCAAAAGATGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAGAAGTTGTCGGGGAATAAATATCTTCTCGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAAGGTTGCTTCAATTGTGCAGTCAAACAAAGTACATGAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTATCCTAAGTTGAATGAGCAGCTGAAGGAGATTGGTATAAAGATAGTTGAGAAGTGCCAAGGGTTGCCTCTAGCCTTAGAAACAGTTGGATGTCTTCTACACACAAAGCCATCTGTTTCACAATGGGTAGGTGTATTGGAATGCAAGATATGGGAGTTGCCGATAGAAGACAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTACCATCTTCCTTCTTATCTCAAGAGATGTTTCGCTTATTGTGCCTTATTCCCCAAAGATCACGAGTTTTACAAGGAGAGCTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATGCTCTCAACAGAGTAATTCTCAAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACGATCCAGTCGAGAAAAGTGTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTGTGGGGACATCTGTTTCAGGTTAGAAGTTGATAAACCAGACAGTATATCAAAAGTCCGTCATTTTTCATTTGTACCCCAATACAATCAATATTTTGATGTGCACGGGAGTTTATATCATGCTAAAATGCTACGGACATTTATGCCCATGCCTGCACCAGCAAGTCGTATATTTACTTGGGGTTGTACGGAACTAGTAGATGAGTTGTTCTCCAAGTTTAAGTTTTTACGCATCTTATCTTTGTTTCATTGTGACCTGAAAGAGATGCCTGACTCTGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTCCAATACTCTCATAAAAAAACTACCTGATTCAACGTGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATTGTTGTTACCGTTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGTTGTCTTGAATTTATGCACACTAAAGTGAGAAAGATGCCAATGCATTTTGGAAAACTGAAGAATCTTCAGGTGTTGAGTTCGTTTTATGTTGGAAAGGGCACCGACAACTGCAGTATTCAACAGCTAGGGGAACTCAATCTTCATGGAAGCTTATCAATTGAGGAGCTGCAAAATATTGTGAATCCCTTGGATGCATTGGCAGCAGATTTGAAAAATAAAACTCATCTTCTGGATCTAAGGTTAGAATGGAATGAGGACCGGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTAGAGAATCTGCAACCTCCAAGACATTTGGAGAAATTGTCAATCCGATACTACGGTGGTACTCAATTTCCTAGTTGGTTATCGGATAATTCATTATGTAATGTGCTGTCCTTAACCTTGACGAACTGTAAATATTTCCTATGTTTGCCTCCCCTTGGACTTTGGCCATTTCTAAAGGAGCTTTCAGTTGGAGGGCTTGATGGGATTGTGAGTATCAATGCTGATTTTTACGGGAGTAGCTCTTGTTCATTTACATCCTTGGAATCTTTGAAGTTCTCCCGTATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTGCTTTTCCACGTCTTCAACGTCTTTCTATAGTGGATTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGTCATTTAAATTATCTAAAGATCTCTGGGTGTGAACAACTTGTACCTTCTGCTCTCAGTGCCCCTGATATTCATCAATTATCCCTAGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAAGAGCTTACCATTGAAGGTCACAACGTGGAGGCAACCTTACTGGAAGAGATTGGGCGCAATTACTCTTGTTCAAATAACAATATTCCCATGCACAGTTGCTATGATTTCCTTGTAAACTTGACCATCATCGGTGGCTGCGACTCTCTAACGACCATTCACTTAGATATGTTCACAATACTCAGGGAGCTTCGTATCTGGGAGTGTCCTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCAGCGTCTGAGTATGGGAGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTCAATCTCTCATGGTAAATGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAGAAAGAATAGGTCTCTATTGTGGTAGTTACAAACTTATGTCCTTATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTATTAATCTTAGATATTGGAGGAGTGGTTGTTGAGTGTCTTCCTGACGAAGGTGTACTGCCACACTCTCTTCTTGCTCTAGAGATCAGGTACTGTCCAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCACTCCTCTCTCAAGGATTTGCGTCTTATTGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAACTTTGCGAATTATCAATTGTCCGTTGCTCAAACAACGTTGCCGGGAACCCGAAGGCGAAGACTGGCCAAAGATTGCTCACATTAAACACGTGTTGTTACATGGTTGA 3561 0.4111 MPVLETLGGALFGAVLQVLFNKLDSHQVLDYFRGRKLNEKLLKKLKRNLVSVKALVDDAEQKQFTDASVKAWLDDVRDVLLDTEDLLEEIDYEFSKTESEAESQTSASKVCDFESRIKDVLDDLDSLLDQKDDLGLKNVSGVGVGSGSGSKVSLKLPSTSLVVESVFYGRDDDKDMILNWLTSDTDNHNKISIFAIVGMGGMGKTTLAQHVYNNPRMEEEVKFDIKVWVCVSDDFDVLMLSKTILNKITKSKDDSGDDLEMVHGRLKEKLSGNKYLLVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNKVASIVQSNKVHELKQLQEDHSWQVFAQHAFQDDYPKLNEQLKEIGIKIVEKCQGLPLALETVGCLLHTKPSVSQWVGVLECKIWELPIEDSKIIPALLLSYYHLPSYLKRCFAYCALFPKDHEFYKESLIQLWVAENFVQCSQQSNSQEEIGEQYFNDLLSRSFFQRSSREKCFVMHDLLNDLAKYVCGDICFRLEVDKPDSISKVRHFSFVPQYNQYFDVHGSLYHAKMLRTFMPMPAPASRIFTWGCTELVDELFSKFKFLRILSLFHCDLKEMPDSVGNLKHLRSLDLSNTLIKKLPDSTCFLCNLQVLKLNCCYRLEELPSNLHKLTNLRCLEFMHTKVRKMPMHFGKLKNLQVLSSFYVGKGTDNCSIQQLGELNLHGSLSIEELQNIVNPLDALAADLKNKTHLLDLRLEWNEDRNLDDSIKERQVLENLQPPRHLEKLSIRYYGGTQFPSWLSDNSLCNVLSLTLTNCKYFLCLPPLGLWPFLKELSVGGLDGIVSINADFYGSSSCSFTSLESLKFSRMKEWEEWECKGVTGAFPRLQRLSIVDCPKLKGHLPEQLCHLNYLKISGCEQLVPSALSAPDIHQLSLGDCGKLQIDHPTTLKELTIEGHNVEATLLEEIGRNYSCSNNNIPMHSCYDFLVNLTIIGGCDSLTTIHLDMFTILRELRIWECPNLQRISQGQAHNHLQRLSMGECPQLESLPEGMHVLLPSLQSLMVNDCPKVEMFPEGGLPSNLERIGLYCGSYKLMSLLKSALGGNHSLLILDIGGVVVECLPDEGVLPHSLLALEIRYCPDLKRLDYKGLCHHSSLKDLRLIDCPRLQCLPEEGLPKSISTLRIINCPLLKQRCREPEGEDWPKIAHIKHVLLHG* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2190 1186 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2190 1186 PRINTS Disease resistance protein signature 269 283 - -
Gso11g2190 1186 PRINTS Disease resistance protein signature 366 380 - -
Gso11g2190 1186 PRINTS Disease resistance protein signature 595 611 - -
Gso11g2190 1186 Pfam Rx N-terminal domain 13 104 IPR041118 -
Gso11g2190 1186 SUPERFAMILY L domain-like 489 892 - -
Gso11g2190 1186 Gene3D - 155 327 IPR027417 -
Gso11g2190 1186 PANTHER OS05G0414200 PROTEIN 27 1022 - -
Gso11g2190 1186 Gene3D - 329 413 IPR042197 -
Gso11g2190 1186 Gene3D Ribonuclease Inhibitor 878 1051 IPR032675 -
Gso11g2190 1186 Gene3D Ribonuclease Inhibitor 683 877 IPR032675 -
Gso11g2190 1186 SUPERFAMILY L domain-like 918 1177 - -
Gso11g2190 1186 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Gso11g2190 1186 Gene3D - 16 129 - -
Gso11g2190 1186 Gene3D Ribonuclease Inhibitor 556 680 IPR032675 -
Gso11g2190 1186 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Gso11g2190 1186 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1022 IPR044974 GO:0006952
Gso11g2190 1186 Coils Coil 42 62 - -
Gso11g2190 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 429 IPR027417 -
Gso11g2190 1186 Gene3D Ribonuclease Inhibitor 1052 1179 IPR032675 -
Gso11g2190 1186 Gene3D - 414 500 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2190 Gso-Chr11 37486481 37492163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2190 191 820 WRKY Transcription Factor Family AT5G45050 24.225 5.48e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2190 - - gmx:100811488 1986.85