Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2189 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTAACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCGTGGAAGAAAGCTCAATGAGAAACTGCTGAAAAAGTTGAAGAGGAACCTGGTGTCTGTCAAAGCTCTGGTTGATGATGCAGAACAAAAGCAGTTCACTGATGCATGTGTGAAAGCATGGCTTGATGACGTCAGAGACGTGTTGCTTGATACCGAGGATCTGTTGGAGGAAATAGACTACGAATTCTCCAAAACTGAGTCGGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAAGGATCAAAGATGTCCTTGATGATCTAGATTCTCTTTTAGACCAAAAGGATGATCTAGGTTTGAAAAATGTTAGTGGTGTTGGGGTTGGATCAGGATCGGGTAGCAAAGTGTCACAGAAATTGCCATCCACATCTTTGGTGGTTGAAAGTGTTTTTTATGGCAGAGATGATGACAAAGATATGATCCTTAATTGGCTGACTTCTGACACAGATAATCATAACAAGATATCAATATTTGCGATTGTGGGAATGGGTGGGATGGGTAAGACCACTCTTGCCCAACATGTATATAACAACCCAAGGATTGAGGAGGAGGCTAAATTTGACCTCAAAGTCTGGGTCTGTGTTTCGGATGACTTTGATGTTTTGATGTTAAGCAAAACAATTCTGAACAAAATCACTAAATCAAAAGATGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAGAAGTTGTCGGGGAATAAATATCTTCTCGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCACTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAAGGTTGCTTCAATCGTGCAGTCAAACAAAGTACATGAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTATCCTAAGTTGAATGAGCAGCTGAAGGAGATTGGTATAAAGATAGTTGAGAAGTGCCAAGGGTTGCCTCTAGCCTTGGAAACAGTTGGATGTCTTTTACACACAAAGCCATCTGTTTCACAATGGGTAGGTGTATTGGAATGCAGGATATGGGAGTTGACGATAAAAGACAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTACCATCTTCCTTCTTATCTCAAGAGATGTTTCGCTTATTGTGCCTTATTCCCCAAACATCACGAGTTTTACAAGGAGAGCTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATTCTCTCAAGAGAGTACTCCTCAAGAAGAAATTGGTGAACAATACTTCGATGATCTATTATCAATGTCCTTCTTTCAACGATCAAGTGGAGAAAACTGTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTATGGGGACATCTGTTTCAGGTTAGAAGTTGATAAACCAGAAAGTATATCAAAAGTCCGTCATTTTTCATTTGTACCCGAATACGATCAATATTTTGATTTGCACGGGAGTTTATATCATGCTAAAATGCTACGGACATTTATGCCCATGCCTGCACCAGCAAGTCGTATATTTACTTGGGGTGGTAGGGAACTAGTAGATGAGTTGTTCTCCAAGTTTAAGTTCTTACGCATCTTATCTTTGTATCATTGTGACCTGAAAGAGATGCCTGACTCTGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTGCTATACTGACATAAAAAAACTACCTGACTCAACGTGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATTGTTGTTACCGTTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGCTGTCTTGAATTTATTTACACTAAAGTGAGAAAGATGCCAATGCATATTGGAAAACTGAAGAGTCTTCAGGTGTTGAGTTCGTTTTATGTTGGAAAGGGCAGCGACAACTGCAGTATTCAACAGCTAGGGGAACTCAATCTTCATGGAAGGCTACTAATTTGGGAGCTGCAAAATATTTTGAATCCCTTGGATGCATTGGCCGCAGATTTGAAAAATAAAACTCATCTTCTGGATCTAGAGTTAGAATGGAATGAGGACCGGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTTGAGAATCTACAACCTTCAAGACATTTGGAGAAATTGTCAATCCGTAACTACAGTGGTACTCAATTTGCTAGTTGGTTATCGGATAATTCATCATGTAATGTGGTGTCCTTAAGCTTGAAGAACTGTAAATATTGCCTATGTTTGCCTCCCCTTGGACTTTTGCCATTTCTGAAGGAGCTTTCGATTGACGGGCTTGATGGGATTGTGAGTATTAATGCTGATTTTTTCGGTAGTAGCTCTTGTTCATTTACATCCTTGGAATCTTTGAAGTTCTCCAATATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTTCTTTTCCACGTCTTCAACGTCTTTATATAGAGGATTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGTCATTTAAATGATCTAAAGATTTCTGGGTGTGAACAACTTGTACCTTCTGCTCTCAGTGCCCCTGATATTCATCAATTATCCCTAGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAACAGCTTGCCATTACAGGCCACAACGTGGAGGCAGCCTTACTGGAAGAGATTGGACGCAATTACTCTTGTTCAAATAACAATATTCCCATGCACAGTTGCTATGATTTCCTTCTAACCTTGCGCATCAATGGTGGCTGCGACTCTTTAACGACCTTTCCGCTAGATATGTTCACAATACTCAGGGAGCTTTGTATCTGGAAGTGCCCTAATCTACAGAGGATTTTGCATGGGCAGGCTCATAATCATCTCAAGACTCTGGGTATCGGATTGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTCAATCTCTCATGGTAAATGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAGAAAGAATAGGTCTCTATTGTGGTAGTTACAAACTTATGTCCTTATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTATTAATCTTAGATATTGGAGGAGTGGTTGTTGAGTGTCTTCCTGACGAAGGTGTACTGCCACACTCTCTTGTTATTCTATTGATCAGGTACTGTCCAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCTCTCCTCTCTCAAGATATTGCATCTTCAAGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAACTTTGCACATTAGCAATTGTCCGTTGCTCAAACAACGTTGCCGGAAACCCCAAGGCGAAGACTGGCCAAAGATTGCTCACATTAAAGACGTGTTTTTTTTATAA 3558 0.4073 MPVLETLGGALFGAVLQVLFNKLDSHQVLDYFRGRKLNEKLLKKLKRNLVSVKALVDDAEQKQFTDACVKAWLDDVRDVLLDTEDLLEEIDYEFSKTESEAESQTSASKVCDFESRIKDVLDDLDSLLDQKDDLGLKNVSGVGVGSGSGSKVSQKLPSTSLVVESVFYGRDDDKDMILNWLTSDTDNHNKISIFAIVGMGGMGKTTLAQHVYNNPRIEEEAKFDLKVWVCVSDDFDVLMLSKTILNKITKSKDDSGDDLEMVHGRLKEKLSGNKYLLVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNKVASIVQSNKVHELKQLQEDHSWQVFAQHAFQDDYPKLNEQLKEIGIKIVEKCQGLPLALETVGCLLHTKPSVSQWVGVLECRIWELTIKDSKIIPALLLSYYHLPSYLKRCFAYCALFPKHHEFYKESLIQLWVAENFVQFSQESTPQEEIGEQYFDDLLSMSFFQRSSGENCFVMHDLLNDLAKYVYGDICFRLEVDKPESISKVRHFSFVPEYDQYFDLHGSLYHAKMLRTFMPMPAPASRIFTWGGRELVDELFSKFKFLRILSLYHCDLKEMPDSVGNLKHLRSLDLCYTDIKKLPDSTCFLCNLQVLKLNCCYRLEELPSNLHKLTNLRCLEFIYTKVRKMPMHIGKLKSLQVLSSFYVGKGSDNCSIQQLGELNLHGRLLIWELQNILNPLDALAADLKNKTHLLDLELEWNEDRNLDDSIKERQVLENLQPSRHLEKLSIRNYSGTQFASWLSDNSSCNVVSLSLKNCKYCLCLPPLGLLPFLKELSIDGLDGIVSINADFFGSSSCSFTSLESLKFSNMKEWEEWECKGVTGSFPRLQRLYIEDCPKLKGHLPEQLCHLNDLKISGCEQLVPSALSAPDIHQLSLGDCGKLQIDHPTTLKQLAITGHNVEAALLEEIGRNYSCSNNNIPMHSCYDFLLTLRINGGCDSLTTFPLDMFTILRELCIWKCPNLQRILHGQAHNHLKTLGIGLCPQLESLPEGMHVLLPSLQSLMVNDCPKVEMFPEGGLPSNLERIGLYCGSYKLMSLLKSALGGNHSLLILDIGGVVVECLPDEGVLPHSLVILLIRYCPDLKRLDYKGLCHLSSLKILHLQDCPRLQCLPEEGLPKSISTLHISNCPLLKQRCRKPQGEDWPKIAHIKDVFFL* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2189 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 429 IPR027417 -
Gso11g2189 1185 Gene3D Ribonuclease Inhibitor 978 1180 IPR032675 -
Gso11g2189 1185 SUPERFAMILY L domain-like 944 1162 - -
Gso11g2189 1185 Gene3D Ribonuclease Inhibitor 561 948 IPR032675 -
Gso11g2189 1185 SUPERFAMILY L domain-like 489 889 - -
Gso11g2189 1185 Gene3D - 414 500 IPR036388 -
Gso11g2189 1185 Gene3D - 147 326 IPR027417 -
Gso11g2189 1185 Gene3D - 329 413 IPR042197 -
Gso11g2189 1185 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Gso11g2189 1185 Gene3D - 16 129 - -
Gso11g2189 1185 Coils Coil 42 62 - -
Gso11g2189 1185 Pfam Rx N-terminal domain 13 104 IPR041118 -
Gso11g2189 1185 PANTHER OS05G0414200 PROTEIN 27 1022 - -
Gso11g2189 1185 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2189 1185 PRINTS Disease resistance protein signature 269 283 - -
Gso11g2189 1185 PRINTS Disease resistance protein signature 366 380 - -
Gso11g2189 1185 PRINTS Disease resistance protein signature 876 892 - -
Gso11g2189 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1022 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2189 Gso-Chr11 37475876 37480833 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2189 191 377 WRKY Transcription Factor Family AT5G45050 27.000 1.39e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2189 - - gmx:100811488 1930.99