Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2187 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTGACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCTTGGAAGAAAGCTCGATGGGAGGCTGCTGAAAAAGTTGAAGAGGAAGCTGGTGTCCGTCAATGCTGTGGTTGATGATGCAGAACAAAAGCAGTTCACTGATGCATATGTGAAAGCATGGCTTGATGACGTCAGAGACGTGTTGCTTGATACCGAGGATCTGTTGGATGAAATAGACTGCGAATTCTCCAAAACTGAGTTGGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAAGGATCATAGATGTCCTTGATGACCTAGATTCTCTTTTAGACCAAAAGAATGATCTAGGTTTGAAAAATGTTAGTCATGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTCACAGAAATTGCCATCCACATCTTTGGTGGTTGAAAGTATTATTTATGGCAGAGATGATGACAAAGAAATAATCCTTAATTGGCTGACTTCTGACACTGACAATCATAACAAGATATCAATACTTTCGATTGTGGGAATGGGTGGGATGGGTAAGACCACGCTTGCCCAACATGTATATAACAACCCAAGGATACAGGAGGCTAAATTTGACATCAAAGTCTGGGTCTGTGTTTCGGATGATTTTGATGTTTTGATGTTAACCAAGACAATTCTTAACAAAATCACTAAATCAAAAGAAGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAAAAGTTGTCGGGGAATAAATATCTTCTGGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCTCTTAAATACGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAAGGTTGCTTCAATCATGCAGTCAAACAAAGTACATGAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTATCCTAAGTTGAATGAGCAGCTGAAGGAGATTGGTATAAAGATAGTTGAGAAGTGCCAAGGGTTGCCTCTAGCCTTAGAAACAGTTGGATGTCTTTTACACACAAAGCCATCTGTTTCACAATGGGAAGGTGTATTGAAAAGCAAGATATGGGAGTTACCGAAAGACAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCCTTATTCCCTAAAGATCACGAGTTTTACAAGGATAGCTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATGCTCTCAAGAGAGTACTCCTCAAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCAAGTTCCTTCTTTCAACGATCAAGTAGACAAGAGTGTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTGTGGAGACATTTGTTTCAGGTTAGAAGTTGATAAACCAAAAAGTATATCAAAAGTCCGTCATTTTTCATTTGTACCTGAATACGATCAATATTTTGATGGGTGCGGGAGTTTATATCATGCTAAAAGGCTACGGACATTTATGCCCGTACCTAGCCCAGCAAGATATATATATACTTGGGATGGTAGGAAACTAGTAGATGAGTTGTTCTCCAAGTTTAAGTTCTTACGCATCTTGTCTTTGTCTTTTTGTTACCTTAAAGAGATGCCTGACTCTGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTCCCAGACTGGCATAAAAAAACTACCTGATTCAACGTGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATTATTGTCACCTTTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGCTGTCTTGAATTTATGCACACTAAAGTGAGAAAGATGCCAATGCATATTGGAAAACTAAAGAATCTTCAGGTGTTGAGTTCGTTTTATGTTGGAAAGGGCAGCGACAACTGCAGTATTCAACAGTTAGGGGAACTCAATCTTCATGGAAGGCTACCAATTTGGGAGCTGCAAAATATTGTGAATCCCTTGGATGCATTGGCAGCAGATTTGAAAAATAAAACCCATCTTCTGGATCTAGAGTTAGAATGGGATGCGGACCGGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTTGAGAATCTGCAACCTTCAAGACATTTGAAGAAATTGTCAATCAGGAACTACGGTGGTGCTCAATTTCCTAGTTGGTTATCGGATAATTCATCATGTAATGTGGTGTCCTTAAGCTTGAAGGACTGTAAATATTGCCTATGTTTGCCTCCCCTTGGACTTTTGCCACGTCTGAAGGAGCTTTCAATTGAAGGGTTTGATGGGATTGTGAGTATTAATGCTGATTTTTTCGGGAGTCGCTCTTCTTCATTTGCATCCTTGAAAACACTGGAGTTCCGCCGGATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTGCTTTTCCATGTCTTCAACGTCTTTCTATGGAGTGTTGTCCCAAGCTGAAAGGGCAGTTGCCAGAGCAACTATGTCATTTAAATGATCTAAGGATTTCTGGGTGCGAACAACTTGTTGTACCTTCTGCTCTCAGTGCCCCAGATATTCATAAATTATACCTAGCAGACTGTGGAAAGCTGCAAATTGATCATGGGACAACTTTGAAAGAGGTTACCATTAGAGGTCACAACGTGGAGGCAGCTTTACTGGAACAGATTGGACGCAATTACTCTTGTTCAAATAACAATATTCCCATCCACAGTTGCTATGATTTCCTTCTATGGTTGGACATCTCTGGTGGCTGCGACTCTCTAACGACCTTTCCGCTAGATATGTTCCCAATACTCAGGAAGCTTGATATCTCGAAGTGTCCTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCAGACTCTGGATATCGATGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGCCCTCCTTCCATCTCTTGATCTGCTGAACATAATTGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAATATATGAGTCTCTATGGTAGTTACAAACTTATGTCCTCATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTAGAAAACTTAGTTATTGGAGGAGTGGATGTTGAGTGTCTTCCTGACGAAGGTGTACTGCCACACTCTCTTGTTAATCTATGGATAAGGGAGTGTGGAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCTCTCCTCTCTCAAGAACTTGCATCTTCAAGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCATTTTTGCGCATTCACAATTGTCCGTTGCTCAAACAACGTTGCCGGGAACCCGAAGGCGAAGACTGGCCAAAGATTGCTCACATTAAACGCGTGGATATAAGGTAG 3552 0.4108 MPVLETLGGALFGAVLQVLFDKLDSHQVLDYFLGRKLDGRLLKKLKRKLVSVNAVVDDAEQKQFTDAYVKAWLDDVRDVLLDTEDLLDEIDCEFSKTELEAESQTSASKVCDFESRIIDVLDDLDSLLDQKNDLGLKNVSHVGVGSGSGSKVSQKLPSTSLVVESIIYGRDDDKEIILNWLTSDTDNHNKISILSIVGMGGMGKTTLAQHVYNNPRIQEAKFDIKVWVCVSDDFDVLMLTKTILNKITKSKEDSGDDLEMVHGRLKEKLSGNKYLLVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNKVASIMQSNKVHELKQLQEDHSWQVFAQHAFQDDYPKLNEQLKEIGIKIVEKCQGLPLALETVGCLLHTKPSVSQWEGVLKSKIWELPKDSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHEFYKDSLIQLWVAENFVQCSQESTPQEEIGEQYFNDLLSSSFFQRSSRQECFVMHDLLNDLAKYVCGDICFRLEVDKPKSISKVRHFSFVPEYDQYFDGCGSLYHAKRLRTFMPVPSPARYIYTWDGRKLVDELFSKFKFLRILSLSFCYLKEMPDSVGNLKHLRSLDLSQTGIKKLPDSTCFLCNLQVLKLNYCHLLEELPSNLHKLTNLRCLEFMHTKVRKMPMHIGKLKNLQVLSSFYVGKGSDNCSIQQLGELNLHGRLPIWELQNIVNPLDALAADLKNKTHLLDLELEWDADRNLDDSIKERQVLENLQPSRHLKKLSIRNYGGAQFPSWLSDNSSCNVVSLSLKDCKYCLCLPPLGLLPRLKELSIEGFDGIVSINADFFGSRSSSFASLKTLEFRRMKEWEEWECKGVTGAFPCLQRLSMECCPKLKGQLPEQLCHLNDLRISGCEQLVVPSALSAPDIHKLYLADCGKLQIDHGTTLKEVTIRGHNVEAALLEQIGRNYSCSNNNIPIHSCYDFLLWLDISGGCDSLTTFPLDMFPILRKLDISKCPNLQRISQGQAHNHLQTLDIDECPQLESLPEGMHALLPSLDLLNIIDCPKVEMFPEGGLPSNLKYMSLYGSYKLMSSLKSALGGNHSLENLVIGGVDVECLPDEGVLPHSLVNLWIRECGDLKRLDYKGLCHLSSLKNLHLQDCPRLQCLPEEGLPKSISFLRIHNCPLLKQRCREPEGEDWPKIAHIKRVDIR* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2187 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1021 IPR044974 GO:0006952
Gso11g2187 1183 CDD AAA 168 281 - -
Gso11g2187 1183 Gene3D Ribonuclease Inhibitor 960 1180 IPR032675 -
Gso11g2187 1183 SUPERFAMILY L domain-like 487 910 - -
Gso11g2187 1183 Gene3D - 412 498 IPR036388 -
Gso11g2187 1183 Pfam Rx N-terminal domain 13 103 IPR041118 -
Gso11g2187 1183 Gene3D Ribonuclease Inhibitor 558 943 IPR032675 -
Gso11g2187 1183 PANTHER OS05G0414200 PROTEIN 27 1021 - -
Gso11g2187 1183 Gene3D - 148 325 IPR027417 -
Gso11g2187 1183 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Gso11g2187 1183 Gene3D - 328 411 IPR042197 -
Gso11g2187 1183 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2187 1183 PRINTS Disease resistance protein signature 268 282 - -
Gso11g2187 1183 PRINTS Disease resistance protein signature 365 379 - -
Gso11g2187 1183 PRINTS Disease resistance protein signature 593 609 - -
Gso11g2187 1183 Coils Coil 42 62 - -
Gso11g2187 1183 Gene3D - 16 128 - -
Gso11g2187 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 427 IPR027417 -
Gso11g2187 1183 SUPERFAMILY L domain-like 947 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2187 Gso-Chr11 37463711 37467583 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2187 191 430 WRKY Transcription Factor Family AT5G45050 27.273 1.11e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2187 - - gmx:100804921 2004.18