Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2181 ATGGGTTGGTCTAATTCGGAGTTGAATTCGCAAATTTTAATCTTGTCTATGCTGATTTTCACTGCAAGTTTCTGTGTTGGGGACACTGACCCACTTGATGTTGCGGCAATCAATAGTTTGTACGTGGCTCTTGGCTCACCACTCCTTGAGGGATGGAAAGCCACAGGAGGAGATCCTTGTTTGGAGCAATGGGAAGGTGTGAGTTGTGTCTTCTCCAACATTACTGCATTACGGCTGGGAGGCATGGATTTAAGTGGAAAGCTGGGAACTAATTTGGATTTCCCATCCATCATAGAAATGGATCTTAGCAACAACCAGATTGGAGGGACCATTCCATTCACTTTGCCCCCTACTTTGAGGAACTTGTCACTATCATCAAATCAGTTAAATGGAAGCATTCCAGATGCCTTATCCTTGTTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAATGGACAAATCCCAAATGCATTTCTAGAACTCACTGGTTTGATGAATTTGGATCTGTCTGGCAACAACTTGAGTGGTAAGCTGCCGCCCTCAATGGGAAATTTGTCTTCTCTTATCACACTAAACTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAACATAGAGAACAATATATTCTCTGGGCCAATTCCCCCAGAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGAAATCCATTTAATACTACTATCATTCCATCACCTCCAGCTGCTTTCCCAGCACCTGCTGCTATGGCTCCTTCCCCAGAAAAATCACCTTGGAAAATGGCACATAATCCCTCTGATACCATAAAAGCACCAATACCTGCAATTGCTGGGAGATCTTTCAAAACTACAAAATTAGTTTGGATTGTTGGTGCAGGCTTTTTGATATTTATTGCATTAGGAGTCTGTCTTCTAATGCTGTGGTGCTTTAAGAGAAGACAGGAAAACAAGAAATATAAGAAACACAACACGAATATGTATACAAGATCTTTGCATAAACGTACATGCAGTAACTCCCCTTTTGAAGCAACTAATGATGAGGAGAAAGAATGCAATAACATTTATGAATTAAACAATACAGAATGGAGTTCCAAACTTCCACCCCTGCAGCCAGCACCACCACATCATATCCCAATCATTCCTGGAGAGAATTTAATAATCAATCCAGCTATATCTACCCAAGCAGCTGAAAGACAAATTGTCACAAATTCCATTAAAGTTTATACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATTGGGGAAGGCATGCTTGGCCCTGTTTACAGGGCTGAACTCCCTGATGGAAAGTTACTGGCAGTTAGGAAGATGAATACTACTGCTTCTATGGGGCAAAATCATGAACAGTTTCTTCAATTAGTTTTCAGTATCTCCAAAATTCAACATGCTAATATTGTTAAGCTTATGGGCTACTGTGCTGAGTATAGTCAACGACTACTTGTACATGAGTATTGCAATAATGGTACCCTACATGAAGCATTGCATACAGATGATAAACTTCAGATTAAACTTTCATGGGATGATCGCATTCAGGTGTCACTTGGAGCTGCAAGAGCTTTGGAGTACTTGCATGAGCACTGTCAACCACCTATTGTGCACCGAAACTTTAGGTCTGCTAATATACTCCTCAATGACAAATTGGAAGTGCTTGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCAGGCTCTGCTAGTCAGTTGTTGGGACGCCACCTCACAGCTAATGGTTACAGTGCTCCAGAATTTGAGTATGGAAGTTATACATTGCAAAGTGATGTCTTTAGCTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTTTGACAGCTCACGGCCTCGTGTAGAGCAATTTTTGATGAGATGGGCAATCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCCTTGAATGGAGAATATCCTAAGAAATCCTTGTCGCGTTTTGCAGACATTATTTCTTCATGTATTCAGAATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTTTTGCGAATGATGTAG 2133 0.4069 MGWSNSELNSQILILSMLIFTASFCVGDTDPLDVAAINSLYVALGSPLLEGWKATGGDPCLEQWEGVSCVFSNITALRLGGMDLSGKLGTNLDFPSIIEMDLSNNQIGGTIPFTLPPTLRNLSLSSNQLNGSIPDALSLLTQLSDLSLKDNHLNGQIPNAFLELTGLMNLDLSGNNLSGKLPPSMGNLSSLITLNLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAAFPAPAAMAPSPEKSPWKMAHNPSDTIKAPIPAIAGRSFKTTKLVWIVGAGFLIFIALGVCLLMLWCFKRRQENKKYKKHNTNMYTRSLHKRTCSNSPFEATNDEEKECNNIYELNNTEWSSKLPPLQPAPPHHIPIIPGENLIINPAISTQAAERQIVTNSIKVYTVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLAVRKMNTTASMGQNHEQFLQLVFSISKIQHANIVKLMGYCAEYSQRLLVHEYCNNGTLHEALHTDDKLQIKLSWDDRIQVSLGAARALEYLHEHCQPPIVHRNFRSANILLNDKLEVLVSDCGLGSLLSSGSASQLLGRHLTANGYSAPEFEYGSYTLQSDVFSFGVVMLELLTGRKSFDSSRPRVEQFLMRWAIPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQNEPEFRPAMSEIVQDLLRMM* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2181 710 PANTHER LEUCINE RICH REPEAT KINASE 2 8 345 - -
Gso11g2181 710 PANTHER LEUCINE RICH REPEAT KINASE 2 405 710 - -
Gso11g2181 710 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Gso11g2181 710 Gene3D Ribonuclease Inhibitor 34 251 IPR032675 -
Gso11g2181 710 Gene3D Transferase(Phosphotransferase) domain 1 510 709 - -
Gso11g2181 710 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 405 710 - -
Gso11g2181 710 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 8 345 - -
Gso11g2181 710 SUPERFAMILY Protein kinase-like (PK-like) 413 706 IPR011009 -
Gso11g2181 710 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Gso11g2181 710 Gene3D Phosphorylase Kinase; domain 1 397 509 - -
Gso11g2181 710 SUPERFAMILY L domain-like 33 236 - -
Gso11g2181 710 ProSiteProfiles Protein kinase domain profile. 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2181 710 Pfam Protein tyrosine and serine/threonine kinase 435 706 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2181 Gso-Chr11 37412901 37418771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2181 19 710 Strubbelig Receptor Gene Family AT4G03390 52.221 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso11g2181 PK_Tyr_Ser-Thr 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2181 - - gmx:100802955 1307.74