Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2177 ATGAGTTTCCATAATATTATGGATAACATTGTATTAAAGATGACTAGTTTATACACCTTGGTTCTCCTACTTTTTCTTTTTCTATCTTATAGACCTGCTCTTTCATTTTCTTCTAGACATAGGCAATATTGGGGTGGTGGTGGGAGGATATTGAGCTCTGGTGAGCATAATGGTGATCTTGTGACTAATTTGCCTGGTCAGCCTAGGGTGAATTTCCAGCACTATGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCTATCACCCAGCCAAAAGAGAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAAGGCCTCAAATTTAATAACTTCTCTTGGAACAAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCAAATACAAGCAGTGACTATGACCAATTGGGAGATGAATTGACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTTCAAAAGTTTCCATCATATCGAGGGAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTTCCAGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGATGGGTCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATCAAACAATCAAAACAAGTTGTGACTTTAACAGTACTGATCCATGGCACAATGAAGATTGTAGCCAAGCTGTGGATGAAGTTCTCAAACAATACAATGAAATTGATATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCAAGTTCTAACGATCAATCCATGCAAACTTCCACGAAGCGTTCATCTAAAATGATGCCAAGAATGTTGGGTGGCTATGATCCATGCCTTGATGGCTATGCTAAAGCATTTTATAATAAACCAGATGTTCAGAAGGCTCTTCATGCCAGCGATGGTCACAATCTAAAGAAATGGAGCATTTGCAACGACAAGATATTCAATGACTGGGCCGATTCAAAGCCATCTGTTATTCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGAATTTGGGTTTATAGTGGAGATACAGATGGTAGAGTACCAGTGCTTTCCACAAGGTACAGCTTAAGCTCTCTTGCGTTGCCTATCACTAAATCATGGAGGCCATGGTATCATGACAATGAGGTTAGTGGGTGGTTTGAAGAATATAAAGGGCTTACATTTGCAACGTTTCGAGGAGCTGGGCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATAA 1482 0.415 MSFHNIMDNIVLKMTSLYTLVLLLFLFLSYRPALSFSSRHRQYWGGGGRILSSGEHNGDLVTNLPGQPRVNFQHYAGYVTVNETNGRALFYWFYEAITQPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNKEANMLFLESPVGVGFSYSNTSSDYDQLGDELTANDAYSFLHNWFQKFPSYRGRTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHQTIKTSCDFNSTDPWHNEDCSQAVDEVLKQYNEIDIYSLYTSVCFASTASSNDQSMQTSTKRSSKMMPRMLGGYDPCLDGYAKAFYNKPDVQKALHASDGHNLKKWSICNDKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPITKSWRPWYHDNEVSGWFEEYKGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2177 493 Pfam Serine carboxypeptidase 66 486 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 SUPERFAMILY alpha/beta-Hydrolases 57 487 IPR029058 -
Gso11g2177 493 PANTHER CARBOXYPEPTIDASE 17 490 - -
Gso11g2177 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 153 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 164 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 Gene3D - 392 486 - -
Gso11g2177 493 ProSitePatterns Serine carboxypeptidases, serine active site. 204 211 IPR018202 GO:0004185
Gso11g2177 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 490 IPR001563 GO:0004185|GO:0006508
Gso11g2177 493 Gene3D - 345 381 - -
Gso11g2177 493 Gene3D alpha/beta hydrolase 56 314 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2177 Gso-Chr11 37346681 37351154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2177 348 487 Calmodulin-binding Proteins AT2G22960 36.170 3.12e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2177 K16297 - gmx:100793427 1003.05