Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2161 ATGCCCCAAGGCAACTTGCATTCATTCACAATGCTTTTCTTCACCCTCTTTCTTCTTTTCCTTTCTCTAATATTCATCATCAAATGGTATTCCAATGCAGTAACCACCAAAAACTCACCCCCTTCACCTCCAAGGTTACCTCTACTGGGTAATCTGCATCAACTTGGTTTGTTCCCACACCGCACACTCCAAACTTTGGCTCAAAACTATGGCCCTCTAATGCTACTTCATTTTGGTAAGGTACCAGTGCTTGTGGTCTCATCTGCTGATGCAGCGTGCGAGGTGATGAAAACTCATGACCTGATCTTCTCAGACAGGCCACAACGTAAGATGAACGACATCCTCATGTACGGTTCCAAAGACCTTGCAAGTTCCACGTACGGAGAATACTGGAGGCAAATGAGGAGTCTAACTGTGTCACAGCTTCTGAACACCAAAAGGGTTCAATCCTTTCGCGGTTCGAGAGAGGAGGAAATTGCTAGAATGATGGAAGACATTAAACGGTGTTGTAGTGATTCGTTGCATGTGAATTTGACTGATATGTTTGCTGCACTTACGAATGATGTGGCGTGTCGAGTGGTTTTTGGAAGAAGATACGGTGGGGGAGAAGGGACTCAGTTTCAGAGTTTGTTGTTGGAGTTTGGGGAGTTGTTGGGTGCTGTGTCTATAGGAGACTATGTTCCTTGGCTTGATTGGGTTATGAACAAGGTTAGTGGTTTGTATGAGAGAGCACAAAGAGTGGCTAAACATTTGGACCAGTTTATAGATGAAGTGATTGAGGAACATGTTAGGAATGGAAGAGATGGCCATGGTGATGTTGATAGTGAGGAGCAGAATGATTTTGTGGACGTTATGCTTTCTATAGAAAAAAGTAACACTACTGGCTCCCTCATTGATAGATCTGCGATGAAGGCTTTGATACTGGACTTTTTTCTTGCTGCTACTGACACTACCACAGCCCTGGAGTGGACAATGTCAGAGCTGTTAAAACACCCAAATGTGATGCATAAATTGCAAGAAGAGGTAAGAAGTGTGGTTGGTAATAGGACTCACGTAACCGAGGATGATTTGGGCCAAATGAACTTCTTGAGGGCTGTGATCAAAGAAAGTCTTCGGCTTCATCCCCCACTTCCCTTAATAGTCCCTAGGAAATGCATGGAAGATATCAAAGTGAAGGAGTATGACATTGCAGCTGGCACTCAGGTATTAGTGAATGCATGGGCAATTGCAAGAAACCCTTCATGTTGGGACCAACCTCTAGAGTTTAAACCAGAAAGGTTCCTCAGCAGTTCAATAGACTTCAAAGGACATGATTTTGAGCTTATACCATTTGGTGCTGGAAGAAGGGGTTGCCCCGCTATAACGTTTGCCACAATTATAGTTGAGGGGATATTAGCAAACCTTGTTCACCAATTTGATTGGTCATTGCCTGGTGGTGCTGCAGGAGAGGACTTGGACATGTCTGAAACTCCTGGCCTTGCTGCTAATAGAAAATATCCTCTTTATGCAGTAGCAACTGCATATGAGAGAAATTAG 1536 0.4388 MPQGNLHSFTMLFFTLFLLFLSLIFIIKWYSNAVTTKNSPPSPPRLPLLGNLHQLGLFPHRTLQTLAQNYGPLMLLHFGKVPVLVVSSADAACEVMKTHDLIFSDRPQRKMNDILMYGSKDLASSTYGEYWRQMRSLTVSQLLNTKRVQSFRGSREEEIARMMEDIKRCCSDSLHVNLTDMFAALTNDVACRVVFGRRYGGGEGTQFQSLLLEFGELLGAVSIGDYVPWLDWVMNKVSGLYERAQRVAKHLDQFIDEVIEEHVRNGRDGHGDVDSEEQNDFVDVMLSIEKSNTTGSLIDRSAMKALILDFFLAATDTTTALEWTMSELLKHPNVMHKLQEEVRSVVGNRTHVTEDDLGQMNFLRAVIKESLRLHPPLPLIVPRKCMEDIKVKEYDIAAGTQVLVNAWAIARNPSCWDQPLEFKPERFLSSSIDFKGHDFELIPFGAGRRGCPAITFATIIVEGILANLVHQFDWSLPGGAAGEDLDMSETPGLAANRKYPLYAVATAYERN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2161 511 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Gso11g2161 511 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 509 - -
Gso11g2161 511 SUPERFAMILY Cytochrome P450 40 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PANTHER CYTOCHROME P450 71B11-RELATED 14 509 - -
Gso11g2161 511 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2161 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2161 Gso-Chr11 37153746 37156583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2161 37 506 Cytochrome P450 AT3G48270 49.576 4.18e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2161 - - gmx:100795528 973