Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2157 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAGGAAAAGGAATCCTTCTCGTACTCCTAATGAGATTGATGGCTTTCCACTTGATAATGTTAAGAATTTCTCTGATAAAGACCTGAGACTGGCCACTGATAACTATAATCCAAGCAAAAAGCTAGGACGAGGAGGTTTTGGTACTGTTTACCAGGGAACTTTAAAAAATGGACAACAGGTGGCAGTGAAGACACTTTCAGCTGGGTCAAAGCAGGGAGTTCGTGAATTTTTAACTGAAATTAAAACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGGTTGGTTGCTGCGTTCAAGAACCTAATCGCATATTAGTGTATGAATATGTGGAAAATAACAGCCTTGATCGTGCATTACTAGGCCCAAGAAGTTCAAATATCAGATTAGACTGGAGAAAAAGATCTGCTATTTGCATGGGTACTGCAAGAGGTCTTGCATTTCTTCACGAAGAACTTGTGCCACACATTGTGCACAGAGACATCAAGGCAAGCAACATACTACTTGACAGAGACTTCAAACCAAAAATAGGAGATTTTGGGTTGGCAAAATTGTTTCCAGACGACATCACTCACATTAGCACAAGGATTGCTGGAACAACTGGTTACTTAGCACCGGAATATGCAATGGGTGGCCAGTTAACCATGAAGGCTGATGTATACAGTTTTGGGGTTCTCATACTTGAAATAATCAGTGGCAAAAGCAGTGCAAGGACAAACTGGGGAGGGTCCAACAAATTTCTATTGGAATGGGCTTGGAACCTATATGAAGAGGGAAAACTGTTGGAGCTTGTGGATCCTGACATGGTTGAATTCCCCGAAGAAGAGGTAATTAGGTACATGAAGGTTGCTTTCTTCTGCACACAAGCAGCAGCAAGTAGAAGGCCAATGATGTCCCAGGTTGTGGATATGCTGTCCAAGAACATGAGGCTGAATGAAAAGCAATTAACAGCACCAGGGTTGTTCCAGGATTCAGGAGCTTCCTCTCAAAAGAAGTCATCCTTTGAATCCACAAGTTATCAATTTAGCTCTAACTCTTCCAGTATTACTCAGTTGTCCCCACGATGA 1104 0.4185 MSCGCFGASTLKRKRNPSRTPNEIDGFPLDNVKNFSDKDLRLATDNYNPSKKLGRGGFGTVYQGTLKNGQQVAVKTLSAGSKQGVREFLTEIKTISNVKHPNLVELVGCCVQEPNRILVYEYVENNSLDRALLGPRSSNIRLDWRKRSAICMGTARGLAFLHEELVPHIVHRDIKASNILLDRDFKPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTMKADVYSFGVLILEIISGKSSARTNWGGSNKFLLEWAWNLYEEGKLLELVDPDMVEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKNMRLNEKQLTAPGLFQDSGASSQKKSSFESTSYQFSSNSSSITQLSPR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2157 367 MobiDBLite consensus disorder prediction 332 367 - -
Gso11g2157 367 SUPERFAMILY Protein kinase-like (PK-like) 31 350 IPR011009 -
Gso11g2157 367 PANTHER - 1 359 - -
Gso11g2157 367 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Gso11g2157 367 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Gso11g2157 367 MobiDBLite consensus disorder prediction 1 25 - -
Gso11g2157 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2157 367 PIRSF TyrPK_CSF1-R 37 128 - -
Gso11g2157 367 PIRSF TyrPK_CSF1-R 137 366 - -
Gso11g2157 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Gso11g2157 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2157 367 CDD STKc_IRAK 53 319 - -
Gso11g2157 367 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Gso11g2157 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Gso11g2157 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2157 Gso-Chr11 37106186 37110844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2157 10 366 Receptor kinase-like Gene Family AT1G56120 48.468 3.40e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2157 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2157 - - gmx:100788143 704.901