Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2128 ATGAAGTTCAACATTGCAAATCCCACCACTGGGTGCCAGAAGAAGCTGGAAATCGATGACGACCTGAAGCTTCGGGCATTTTGGGACAAGAGGATCTCCCAGGAGGTCCTTGGTGACGCCCTGGGTGAGGAGTTTAAAGGATATGTTTTCAAAATCACTGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTTCGACTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGAAGGAAATCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAAAAGGGTGAGAGTGACTTGCCCGGTCTCACTGATGTTGAGAAGCCAAGGATGAGGGGTCCAAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACCTGTCCAAGGAGGACGATGTGAGAAAGTATGTTAACACATACCGTCGAACCTTTATAACAAAAGCTGGGAAAAAAGTGAGCAAAGCTCCAAAGATTCAACGATTGGTCACTCCTTTGACACTCCAAAGGAAACGAGCAAGGATTGCCGACAAGAAGAAGAGAATTGCTAAGGCAAAATCAGAAGCAGCAGAGTATCAAAAACTCCTTGCTTCCAGATTGAAGGAGCAGAGAGATCGCCGGAGTGAGAGCTTGGCTAAACGGAGATCCAAACTTTCCAGTGCTGCAAAACCAACTGTCTCAGCATAG 750 0.4747 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFITKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLSSAAKPTVSA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2128 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 - -
Gso11g2128 249 MobiDBLite consensus disorder prediction 218 237 - -
Gso11g2128 249 Gene3D - 133 241 - -
Gso11g2128 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso11g2128 249 Coils Coil 189 216 - -
Gso11g2128 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gso11g2128 249 MobiDBLite consensus disorder prediction 218 249 - -
Gso11g2128 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Gso11g2128 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso11g2128 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2128 Gso-Chr11 36812179 36814797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2128 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.289 1.88e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2128 K02991 - gmx:100819697 450.669