Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2102 ATGAACCATGGCACGTACATTGCTTATGATGTGGTCATGGTTACTCTATCCATATCCTTCTTTGTTCTTGCTGTTGTTCTCTATCTTGTGTGCAAGAAGAAACCGGTTGAATCAGAAGAAACACTTGCTGTGAAGCATTGTGCTCGTGCATACTCATTGATGGACATTCATGCTGCCACTGATGGCTTCAACCATAGCAGAATTCTGGGAAAGGGTCGCGTAGGAACCGTGTATGCCGGTGTACAAGAGAATGGAGAACTTGTGGCTGTGAAAAGGATTCATTCCGTTCTTGTGTTGAGCAATGCAGGATTTGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGCTCAACACCCCAACATTGTTTCTATCCTAGGATTCTCCGAAGCACCGGGCGAGAGGATCATAGTGATGGAGTTTGGGAGAATGGTGAGTTTGGATTTCTATTTGCATCAAAATGTTAATGGTGCATCACTCTTGGATTGGAACAAGAGGATCAGAATTGCGTCTGGAGCAGCTAGAGGGATTCAGTACCTTCATGAAGTGGCGACACCAAACATTGTACATGGGTGTGTCAAGTCCTCAAATGTTTTAATTGATGTCAATTTTTGTCCTAGGATTTGTGATTATGGTCTCAATTTTTTGGCACCCCGAGAAAAGAGAGGGCTAGTAGGGTATGTGGATGATGAGTATTGGAATGAAGAAGGGGGTGGTGCTAGCAAGGAAAGTGATGTTTATGGGTTAGGGGTGATCATGCTTGAGCTATTAAGTGGTAGAGGGTGTGAGGAAGGATTGATAGCTAAATGGGCATTGCCTTTGATCAAGGAAATGAGTTTTGGTGAACTTTTGGATGCTAGGTTGGTGATTCCTTCTGACATGAAGCCTCTAGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAGTGTAGGCCTTCCATTGCTCAAGTGACAACTATTTTGAACAATATAGAGATGGAAGTGTGCATATGA 1002 0.4311 MNHGTYIAYDVVMVTLSISFFVLAVVLYLVCKKKPVESEETLAVKHCARAYSLMDIHAATDGFNHSRILGKGRVGTVYAGVQENGELVAVKRIHSVLVLSNAGFGFSSVLKWLSSAQHPNIVSILGFSEAPGERIIVMEFGRMVSLDFYLHQNVNGASLLDWNKRIRIASGAARGIQYLHEVATPNIVHGCVKSSNVLIDVNFCPRICDYGLNFLAPREKRGLVGYVDDEYWNEEGGGASKESDVYGLGVIMLELLSGRGCEEGLIAKWALPLIKEMSFGELLDARLVIPSDMKPLVRLAKVASACVGNSRKCRPSIAQVTTILNNIEMEVCI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2102 333 Pfam Protein kinase domain 64 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2102 333 Gene3D Phosphorylase Kinase; domain 1 26 140 - -
Gso11g2102 333 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2102 333 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 332 - -
Gso11g2102 333 PIRSF ILK 31 332 - -
Gso11g2102 333 Gene3D Transferase(Phosphotransferase) domain 1 143 331 - -
Gso11g2102 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 332 - -
Gso11g2102 333 SUPERFAMILY Protein kinase-like (PK-like) 41 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2102 Gso-Chr11 36567391 36569352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2102 40 324 Receptor kinase-like Gene Family AT3G59420 41.000 2.54e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso11g2102 Pkinase 5.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2102 - - gmx:100809726 661.759