Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2101 ATGACATGGTGCAATGACTCAGAGGAGAGGGGAATTGATCAACTGGTTGCACCAGCTATTACTCCTACTTCAACTAATAACACTACTGTTCTTACTCATGATCATCACAGAAAACCAACTGAAATTCGCACCATAACTTGCCCCTCATGTGGTCATAACATTGAATTCCAAGATCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAGGAGATATTAGAGCATTTGGAAGCAAAGGTATTCTCTGATGTGCCAAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAATGGGATCTGTTATACTCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAAATCCGCCACTTCTTTCACAGGCCATCTAAAGCGTACACAACCGGAACAAGGAAAAGAAGAAAGGTTCACACTGATAAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACAAGACCAGTTTTCGTAGGTGGTGCTGTGAAGGGTTTCAAGAAAATCCTTGTCCTCTACACCAACTATGGAAGACAACAGAAGCCCGAGAAGACCAATTGGGTGATGCATCAATACCACCTTGGTACTAGCGAAGAAGAGAAAGATGGAGAGTTGGTGGTTTCAAAGATTTTCTACCAAACACAACCTCGACAATGTGGTAATAATTCCATTATAAAGCAGGATCTTTATGATGAAGAAAGATTGATGTCTAACCAAATTAGTGTCCATAATGATGATGACAATAATATAATACCTAGAAGTAATAATGCAAGTGCTCTCATGGACTACTACAATCCTTCTTTCATAAATTATGACCAATTAGGTGGTCGTAGTAATAGGGAAAGTTCAGCTCAACTTATTCCAAATTTGGCCATGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAAAGCCATGCTGGACAGAAAATAG 987 0.4093 MTWCNDSEERGIDQLVAPAITPTSTNNTTVLTHDHHRKPTEIRTITCPSCGHNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVFSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDKEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQQKPEKTNWVMHQYHLGTSEEEKDGELVVSKIFYQTQPRQCGNNSIIKQDLYDEERLMSNQISVHNDDDNNIIPRSNNASALMDYYNPSFINYDQLGGRSNRESSAQLIPNLAMQGDSSSFIRLAMDATKAMLDRK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2101 328 Pfam No apical meristem (NAM) protein 69 208 IPR003441 GO:0003677|GO:0006355
Gso11g2101 328 ProSiteProfiles NAC domain profile. 68 227 IPR003441 GO:0003677|GO:0006355
Gso11g2101 328 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 312 IPR044799 GO:0003700
Gso11g2101 328 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 312 - -
Gso11g2101 328 Gene3D NAC domain 77 231 IPR036093 GO:0003677|GO:0006355
Gso11g2101 328 SUPERFAMILY NAC domain 63 227 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2101 Gso-Chr11 36553694 36557688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2101 1 236 NAC Transcription Factor Family AT4G28500 70.293 2.31e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso11g2101 NAM 4.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2101 - - gmx:100783888 662.914