LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g2091	ATGGTTTTCTGTGGCAACAGCACTGAAGAGAGTGAACTGCATCATGCTCAAATTCATTTGTACAAACACGTATACAACTTTGTGAGTTCCATGGCTCTTAAGTCTGCTATGGAATTAGGCATAGCAGACGTAATCCATAGCCACGGAAAACCCATGACTATTTCCGAGTTATCCTCAGCTCTCAAATTGCACCCTTCAAAAGTGAGTGTCCTCCAACGCTTTCTCCGCCTTTTAACGCACAATGGGTTCTTTGCAAAAACAATATTGCCGTCAAAGAACGGTGTAGAAGGAGGAGAAGAAATAGCGTATGCTCTTACTCCTCCTTCGAAGCTTCTAATAAGAAACAAGTCAATATGTTTGGCGCCTATTGTGAAGGGAGCTCTTCATTCGAGCTCCCTTGACATGTGGCATTCCTCCAAGAAATGGTTCAGTGAGGATAAGGAACTGACACTGTATGAGAGTGCAACTGGGGAGAGTTTCTGGGACTTTCTCAACAAAACCACTGAATCTGACACGCTGGGTATGTTTCAAGATGCCATGGCTGCAGATTCTAAGGTGTTCAAACTTGCACTCGAGGAATGCAAGCATGTGTTCGAGGGATTGGGTTCCCTCGTCGATGTGGGTGGTGGAACTGGTGTTGTCACAAGACTCATCAGTGAAACCTTCCCTCACTTGAAATGCACTGTGTTTGACCAACCACAGGTTGTGGCTAATTTAACTGGAAACGAAAATTTGAACTTTGTTGGTGGAGATATGTTCAAGTCCATCCCCTCTGCCGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAACGATGAACTCTCTGTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAAAGGGAAAGAAGGAAAGGTTATAATTATAGACATAGCAATTGATGAAGTAGGTGATGATCGCGAAATGACTGAATTGAAGCTAGACTATGATTTAGTGATGTTGACTATGTTTAATGGAAAAGAAAGAGAAAAGAAAGAGTGGGAGAAACTAATTTACGAGGCAGGATTCAGCAACTACAAAATTATTCCCATATGTGGATTCAAATCTCTCATTGAAGTTTATCCTTAA	1098	0.4208	MVFCGNSTEESELHHAQIHLYKHVYNFVSSMALKSAMELGIADVIHSHGKPMTISELSSALKLHPSKVSVLQRFLRLLTHNGFFAKTILPSKNGVEGGEEIAYALTPPSKLLIRNKSICLAPIVKGALHSSSLDMWHSSKKWFSEDKELTLYESATGESFWDFLNKTTESDTLGMFQDAMAADSKVFKLALEECKHVFEGLGSLVDVGGGTGVVTRLISETFPHLKCTVFDQPQVVANLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGKGKEGKVIIIDIAIDEVGDDREMTELKLDYDLVMLTMFNGKEREKKEWEKLIYEAGFSNYKIIPICGFKSLIEVYP*	366

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g2091	365	Gene3D	-	3	112	IPR036388	-
	Gso11g2091	365	SUPERFAMILY	"Winged helix" DNA-binding domain	10	116	IPR036390	-
	Gso11g2091	365	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	21	365	IPR016461	GO:0008168
	Gso11g2091	365	Pfam	Dimerisation domain	31	79	IPR012967	GO:0046983
	Gso11g2091	365	Pfam	O-methyltransferase domain	136	347	IPR001077	GO:0008171
	Gso11g2091	365	Gene3D	Vaccinia Virus protein VP39	113	365	IPR029063	-
	Gso11g2091	365	PANTHER	O-METHYLTRANSFERASE	5	365	IPR016461	GO:0008168
	Gso11g2091	365	PANTHER	ISOFLAVONE 4'-O-METHYLTRANSFERASE	5	365	-	-
	Gso11g2091	365	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	119	364	IPR029063	-
	Gso11g2091	365	PIRSF	O-mtase	4	365	IPR016461	GO:0008168

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g2091	Gso-Chr11	36406962	36408724	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso11g2091	28	352	Monolignol Biosynthesis Gene Families	AT5G54160	33.841	3.47e-48	165

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g2091	K22588		-	gmx:106795493	717.998

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