Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2080 ATGGAAGCCTCTAACTCACATTCGTTTCTCTCTCTTGTGCACCTTTTTGTGCTTTTCTTATTGTTATGTTTTGTGGTTACAATTGAAGCTAATTCAAAGAAGAAGGTCTCAGCCTTTTATGTGTTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTTCATAGACACGGCTTTCAGGAGCGATTTTCCTCCCTATGGTAGAGATTTTGTTAACCAGGCTGCCACTGGAAGGTTCACCAATGGGAAGCTTGGCACTGATTTTCTTGCTTCATATCTGGGCCTAAAGGAGTTGGTGCCGCCATATTTGGATCCAAATCTCAGCGACAAAGAACTTGTAACTGGTGTCAGTTTTGCCTCTGCTGGTTCTGGGTTTGACCCTCTCACTCCAATGCTGGGAAATGTAATTCCAATAGCAAAGCAGTTGGAATATTTCAAAGAATACAAAAAGAGGTTAGAGGGTACGCTTGGTAAGAAAAGAACCGAATATCATATAAGCAATGCTTTATTTTTCATCAGCGCAGGCACAAATGACTACGTCATTAACTATTTTTCGTTGCCAATACGAAGAAAGACCTACACCACCCCCTTAACCTACGGACACTTCTTGCTTCAACACGTAAAAGAATTCATACAGAATTTATGGAAAGAAGGTGCACGGAAAATAGCTTTGGTTGGAGTACCTCCAATGGGATGCTTGCCGATCATGATCACCTTGAATTCCCATAATGTCTTTCTCGAACGTGGTTGTGTGGACAAGTATTCTGCTGTTGCAAGAGATCACAATATGATGCTTCAACATGAATTGTTCTTAATGCAACTAAATTTCTCCAATACTAACCCTGCCGGTGCTAAAATATCTTACCTCGACATATATGGACCCTTGGATGACATGATTCAAGCGCATCAAAACCTAGGTTTTGATGAGGTTGATCGTGGTTGTTGTGGAAGTGGTTACATCGAAGCAACTTTTATGTGTAATGGGGTTTCATATGTGTGCTCTGATCCATCTAAGTTTGTCTTCTGGGATTCAATACACCCTACGGAGAAGGCATACTATGACCTATTTATGGCCGCCCGTCCCACAATTGATGCCCTTATCAATGGCTAG 1110 0.418 MEASNSHSFLSLVHLFVLFLLLCFVVTIEANSKKKVSAFYVFGDSTVDPGNNNFIDTAFRSDFPPYGRDFVNQAATGRFTNGKLGTDFLASYLGLKELVPPYLDPNLSDKELVTGVSFASAGSGFDPLTPMLGNVIPIAKQLEYFKEYKKRLEGTLGKKRTEYHISNALFFISAGTNDYVINYFSLPIRRKTYTTPLTYGHFLLQHVKEFIQNLWKEGARKIALVGVPPMGCLPIMITLNSHNVFLERGCVDKYSAVARDHNMMLQHELFLMQLNFSNTNPAGAKISYLDIYGPLDDMIQAHQNLGFDEVDRGCCGSGYIEATFMCNGVSYVCSDPSKFVFWDSIHPTEKAYYDLFMAARPTIDALING* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2080 369 CDD SGNH_plant_lipase_like 38 352 IPR035669 -
Gso11g2080 369 Pfam GDSL-like Lipase/Acylhydrolase 40 353 IPR001087 GO:0016788
Gso11g2080 369 Gene3D SGNH hydrolase 25 364 IPR036514 -
Gso11g2080 369 SUPERFAMILY SGNH hydrolase 40 354 - -
Gso11g2080 369 PANTHER GDSL ESTERASE/LIPASE EXL3 7 367 - -
Gso11g2080 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2080 Gso-Chr11 36282335 36286623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2080 38 352 Pollen Coat Proteome AT1G75910 36.420 4.31e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2080 - - gmx:100804919 731.48