Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2078 ATGTCTCTCCCTTCTTTTGCTACCACTTCTTTTTCATTTCTATTCACATCTTTCTTTGTTTTCTTCATCTTGTGTGGAAATTCTTCATCTTCCTTAGCAATACATGCCAACACTACACGCCCCCCTCGCCAGCTCTCAGTAAGTTACTATGCCAAATCATGCCCTCAGGTAGAACAGCTTGTTGGCTCAGTCACCTCTCAACAATTCAAAGAATCACCTGTTTCTGGCCCTGCCACCATTCGTCTCCTCTTCCATGATTGCTTTGTAGGAGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCTGGGAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAGAGACTTGAAGGTGGAAGCTTTTGAGACTGTGAGAAAGGCTAAGGAACAAGTGGAGAGAAAGTGCCCTGGTGTGGTGTCATGTGCGGACATTCTTGTAATTGCAGCCAGAGATTATGTTCACCTGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAACGGCATCAAGGGTGGCCTCCAACATCCCTCATGCAAACTCCACCGTTGATCAACTCATCAAACTCTTCACCTCAAAGGGTCTAACCACACAAGACCTAGTAGCCCTATCAGGGGCCCACACAATAGGGTTTGCCCACTGCAAGAACTTCGTGGCCCGCCTCTACAGTTACCGAGGCAAGGCTCAACCGGACCCAAACATGGACCCAAAACTATTACATGTACTTAGAATGTATTGTCCAAACTTTGGTGGAAACTCTGACATTGTTGCCCCTTTTGATGCCACTACCCCATTCCTATTTGACCATGCCTATTATGGTAACTTGCAAAAGAAGTTGGGCTTGTTGGCATCTGACCAGACCTTGGCTTTGGACCCACGAACCAAGCCCATTGTTGAGGATCTTGCAAAGGACAAGCAGAAGTTTTTTAAAGCTTTTGTGGGGGCTATGGACAAATTGAGTTTGGTGAAAGTGGTGAGAGGGAAAAGGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1050 0.46 MSLPSFATTSFSFLFTSFFVFFILCGNSSSSLAIHANTTRPPRQLSVSYYAKSCPQVEQLVGSVTSQQFKESPVSGPATIRLLFHDCFVGGCDASILIASKPGSKELAEKDAEDNRDLKVEAFETVRKAKEQVERKCPGVVSCADILVIAARDYVHLAGGPYYQVKKGRWDGKISTASRVASNIPHANSTVDQLIKLFTSKGLTTQDLVALSGAHTIGFAHCKNFVARLYSYRGKAQPDPNMDPKLLHVLRMYCPNFGGNSDIVAPFDATTPFLFDHAYYGNLQKKLGLLASDQTLALDPRTKPIVEDLAKDKQKFFKAFVGAMDKLSLVKVVRGKRHGEKRRDCSMHM* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2078 349 Pfam Peroxidase 64 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Gso11g2078 349 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PANTHER PEROXIDASE 25-RELATED 33 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 Gene3D - 48 347 - -
Gso11g2078 349 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 CDD secretory_peroxidase 44 346 IPR033905 GO:0004601|GO:0042744
Gso11g2078 349 ProSiteProfiles Plant heme peroxidase family profile. 44 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 SUPERFAMILY Heme-dependent peroxidases 44 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso11g2078 349 PANTHER PEROXIDASE 19 33 345 - -
Gso11g2078 349 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Gso11g2078 349 Gene3D Peroxidase, domain 2 185 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2078 Gso-Chr11 36267344 36272218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2078 11 349 Peroxidase AT2G34060 60.465 1.89e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2078 K00430 - gmx:100777463 685.641