Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2063 ATGCAGGTCATGGCCTCTAGAATTCTTTCAACTCTACATTATGTGTGTTCTTCTTCTGCCTCAGCCACAAAACGATGTTTAGGCCTATATAGTCATTGGCAGAGAAGTATAAGTGGAATTGCTGCGTCTGTTGTTGCTGATGTGGAGCCTAGCATAGCACCAGTGCAAATTGATCAAAGTCAGCTTCTAATTGATGGGAAATTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACTTTTGATCCTAGGACTGGAGATGTAATTGCCAATGTTGCTGAAGGAGATGCTGAAGATGTAAATCGCGCTGTCCATGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGTATAATTTTGCGCTTTGCTGATTTATTGGAGAAACACAATGATGAAGTTGCAGCCATAGAAACATGGGATAGTGGCAAGACTTATGAACAGGCTGCAAATGTTGAAATACCCATGGTAGTACGATTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCACGGTCTAACAGTTCCAGCTGATGGACCATACCATGTCCAAACTTTGCATGAACCAATTGGTGTAGCAGGGCAGATTGTTCCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTAATACAGTTGTAATGAAAACTGCAGAGCAGACACCCCTTTCAGCCCTATATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCTCTGGCTTTGGTCCTACTGCTGGTGCAGCACTGTGTAGTCATATGGACGTTGACAAGCTTGCTTTCACAGGATCCACTAGCACTGGTAAACGTGTACTTGAACTGTCTGCACACAGCAACCTGAAGCCAGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTGTGCAAGGATGCTGATGTTGATGCAGCCGTTGAGGCTTCACATTTTGCTTTATTTTTTAATCAGGGGCAATGTTGCTGTGCTGGTTCTCGCACATTTGTCCATGAAAGCATATATGGTGAATTTGTTGAAAAGGCTAAAGCCCGTGCTCTTAAACGAGTAGTTGGAGACCCTTTCAAAAATGGGGTTGAGCAAGGTCCTCAGATTGATTCTGTGCAATTCGAGAAGATCATGAAATACATAAGATCAGGCGTTGAAAGTGGTGCTCAACTGGAATCTGGTGGTCAAAGAATTGGCTCCAAAGGCTACTACATCCAACCCACTGTTTTCTCAAATGTTCAGGACAACATGTTGATAGCAAAAGATGAGATATTTGGTCCAGTACAATCTATCTTGAAATTCAAGGATCTAGAGGAAGTGATAAGAAGAGCCAATGCAACTTCCTATGGCCTGGCTGCTGGAGTTTTTACTAAAAATATGGACACTGCCAACACCTTGATGCGAGCATTGCAAGCTGGAACGGTATGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGATATAAGATGAGTGGTCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTGTTGTCACTGCTTTGAAGAATCCCGCATGGCTGTAG 1623 0.4325 MQVMASRILSTLHYVCSSSASATKRCLGLYSHWQRSISGIAASVVADVEPSIAPVQIDQSQLLIDGKFVDAASGKTFPTFDPRTGDVIANVAEGDAEDVNRAVHAARKAFDEGPWPKMTAYERSRIILRFADLLEKHNDEVAAIETWDSGKTYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGNTVVMKTAEQTPLSALYVSKLFLEAGLPPGVLNVISGFGPTAGAALCSHMDVDKLAFTGSTSTGKRVLELSAHSNLKPVTLELGGKSPFIVCKDADVDAAVEASHFALFFNQGQCCCAGSRTFVHESIYGEFVEKAKARALKRVVGDPFKNGVEQGPQIDSVQFEKIMKYIRSGVESGAQLESGGQRIGSKGYYIQPTVFSNVQDNMLIAKDEIFGPVQSILKFKDLEEVIRRANATSYGLAAGVFTKNMDTANTLMRALQAGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKAVVTALKNPAWL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2063 540 CDD ALDH_F2BC 57 532 - -
Gso11g2063 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Gso11g2063 540 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 26 540 - -
Gso11g2063 540 Pfam Aldehyde dehydrogenase family 68 530 IPR015590 GO:0016491
Gso11g2063 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 528 IPR016162 GO:0016491
Gso11g2063 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 540 - -
Gso11g2063 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Gso11g2063 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Gso11g2063 540 SUPERFAMILY ALDH-like 59 533 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2063 Gso-Chr11 36085055 36089444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2063 5 540 Aldehyde Dehydrogenase Gene Family AT3G48000 73.134 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2063 K00128 - gmx:100798892 1081.24