Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2033 ATGGATGACTTGCTGCAGTGCACGACAGCTAGTCAACTCTTGAAATTACGTATTCCAGAACAGGGCACCGGCAAAAGGGTGATTGAGTTGGGGTCACGGCTCTCCCCCGAAGGAAATCAAAGTTCATGGGCATCAAGTTCCGGCCATTTTGCTTTTGGCTTTTACTCACAAGGTGATGGCTTTGCAGTTGGAATATGGCTGGTTAATGTTAGTCCAGCTGAAAATACTATTGTCTGGACTGCTAACCGTGACAGCCCCCCACTCTCCTCTAATTCAACGTTGCAGTTGACCAAGACTGGCCTTTTGTTTTTCCAAGATGGACGCCAAGGCCAAGTTCTCCTTTCAAATTTTGTTGACGTAACTTCTTCGGCATCTATGCTTGATTCTGGCAACTTTGTACTCTATGATGATACCCACAACACTGTTGTCTGGCAAAGCTTTGAGCATCCAACTGACACCATATTAGGAGGTCAGAATTTAAGTATAAATGCCAAACTGGTTTCTAGTGTGTCCAATTCAAGTCATTCGAGTGGACGTTTCTTTCTCCTCATGCAAGGTGATGGAAACCTCGTTGCTTACCCTGTGAACAGCCCAGAAACTGGCGGTGATGCTTACTGGGCTTCAAATACTAGAGGTTCAACATTCCAACATCTCAGTCTTAATGTCTTGGGCTTTCTCTGTCTTAGTGGTCCTGGAAATCTTCACTGTTTTTTTAACCATAGCGTTAGCCCTGGAATGAAATCACAGAACAAAACTTCAATCTACCGTTCAACTGTTGATGTAGACGGGAACTTGAGATTGTACGAGCACCAATTAGAGGGCAATGGTAGCTCACATGTCCAAGTACTGTGGAGCACCCCACTTAAGAAATGTGAAACCAAGGGGTTTTGTGGCTTCAACAGTTACTGCTCCATCGTAACAGGTCATGCCATGTGCGAATGTTTTCCTGGTTTCGTCCCATCCAAAAGCAACGGTAACGTGTCTCTAGATTGCGTACTGGCCCATAGCAAGGGTAGTTGCAAAAGCAGCGAAGATGCAATGATTTCGTATAAAATTACTATGTTGGAGAATATGTCTTTTAGTGATAGTGATGATCCATATTGGGATAGCCAGATGAAGAAAGAGGAGTGCGAGAAGTCTTTCCTGGAAGATTGTGATTGCATGGCAGTATTATATTTGAACGGTAATTGCAGAAAATACAGACTTCCGCTAACATATGGAAGAACGATTCAAAATCAAGTGGCCGTGGCCCTCTTCAAGGTGCCTTCAGGAATTGTGGATAGTTCAACTCCAAACAACTCCACACTCAAGCCTAGGATCATCGTCGATAACAAGAAAAGACTGGTAATGGTTCTTGCCATTACTTTGGGTTGCCTTTTATTGTTATCTTTGGCCTTGGCAGGGTTCATTTTCCTCATTTATAAGCGGAAAGTTTACAAGTACACAAAGTTGTTTAAGAGTGAGAATCTGGGATTTACTAAAGAATGTTCTTTGCATCCGTTTTCTTTTGATGAACTTGAAATATCCACTCGAAGCTTCACAGAGGAGATAGAGAGAGGGTCCTTTGGAGCGGTTTATAGAGGCACAATTGGTGACACTAACACAAGTATCGCCGTCAAGAGATTAGAGACAATTGCTGATGAAGGGGAGAGGGAATTTCGAACTGAAATTACTGCCATTGCTCGAACACATCATAAGAATTTGGTGAAGCTCATTGGTTTTTGCATCAATGGAGCTAGGAAGCTTCTTGTTTATGAATATGTCAGCAACGGGTCTCTTGCAAGTCTTCTCTTCAATGATGAGAAGCACATGTCTTGGAGAGACAGACTAAAAATCGCCTTGGATGTTGCTAGAGGAGTCCTATATCTACATGAAGAGTGTGAGGTCCGTATTATCCATTGCAGTATAAATCCTCGAAATATACTTATGGATGAAGTATGGACTGCAAAGATCTCTGATTTTGGATTGGCAAAGCTACTGAAGCTTGACCATTCAAGAATGAAAAATGAGGATGATGAGACAAGCAAGTACTTGGCACCTGAATGGCAGAAGGATGCACCAATATCAGTAAAATTTGACATTTACAGTTTTGGGATGGTACTACTGGAGATTGTCTGCCGCAGACGCAGCATAGAAATGAATGTTTCCTCAGTGGAGGAGATACATCTTTCCAGCTGGGTATATCAATGCTTTGCAGCAGGGCAATTAAATAAGCTTGTTAAAGAAGATGAAGGTACTGTAGATTGGAGGATACTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACAGTCCACCTCTTCGTCCTTCAATCAAGAACGTCATCTTGATGTTGGAAGGATTGAAAGATATTCCAATTCCTCCCCCTCCAGCCGAGACCTCCTTAAATAAATATTCTTAG 2406 0.4268 MDDLLQCTTASQLLKLRIPEQGTGKRVIELGSRLSPEGNQSSWASSSGHFAFGFYSQGDGFAVGIWLVNVSPAENTIVWTANRDSPPLSSNSTLQLTKTGLLFFQDGRQGQVLLSNFVDVTSSASMLDSGNFVLYDDTHNTVVWQSFEHPTDTILGGQNLSINAKLVSSVSNSSHSSGRFFLLMQGDGNLVAYPVNSPETGGDAYWASNTRGSTFQHLSLNVLGFLCLSGPGNLHCFFNHSVSPGMKSQNKTSIYRSTVDVDGNLRLYEHQLEGNGSSHVQVLWSTPLKKCETKGFCGFNSYCSIVTGHAMCECFPGFVPSKSNGNVSLDCVLAHSKGSCKSSEDAMISYKITMLENMSFSDSDDPYWDSQMKKEECEKSFLEDCDCMAVLYLNGNCRKYRLPLTYGRTIQNQVAVALFKVPSGIVDSSTPNNSTLKPRIIVDNKKRLVMVLAITLGCLLLLSLALAGFIFLIYKRKVYKYTKLFKSENLGFTKECSLHPFSFDELEISTRSFTEEIERGSFGAVYRGTIGDTNTSIAVKRLETIADEGEREFRTEITAIARTHHKNLVKLIGFCINGARKLLVYEYVSNGSLASLLFNDEKHMSWRDRLKIALDVARGVLYLHEECEVRIIHCSINPRNILMDEVWTAKISDFGLAKLLKLDHSRMKNEDDETSKYLAPEWQKDAPISVKFDIYSFGMVLLEIVCRRRSIEMNVSSVEEIHLSSWVYQCFAAGQLNKLVKEDEGTVDWRILERMVKVGLWCVQDSPPLRPSIKNVILMLEGLKDIPIPPPPAETSLNKYS* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2033 801 Pfam D-mannose binding lectin 76 166 IPR001480 -
Gso11g2033 801 ProSiteProfiles Protein kinase domain profile. 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2033 801 CDD B_lectin 45 150 IPR001480 -
Gso11g2033 801 Gene3D Transferase(Phosphotransferase) domain 1 588 788 - -
Gso11g2033 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 210 IPR036426 -
Gso11g2033 801 SUPERFAMILY Protein kinase-like (PK-like) 494 781 IPR011009 -
Gso11g2033 801 Pfam Protein tyrosine and serine/threonine kinase 513 718 IPR001245 GO:0004672|GO:0006468
Gso11g2033 801 Pfam S-locus glycoprotein domain 240 321 IPR000858 GO:0048544
Gso11g2033 801 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Gso11g2033 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 17 797 - -
Gso11g2033 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 270 IPR036426 -
Gso11g2033 801 Gene3D - 151 295 - -
Gso11g2033 801 Gene3D Phosphorylase Kinase; domain 1 475 587 - -
Gso11g2033 801 SMART blect_4 34 150 IPR001480 -
Gso11g2033 801 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 17 797 - -
Gso11g2033 801 PIRSF SRK 4 801 IPR024171 GO:0004674
Gso11g2033 801 Gene3D - 26 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2033 Gso-Chr11 35818180 35821134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2033 428 786 Receptor kinase-like Gene Family AT1G56120 34.711 5.66e-59 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso11g2033 PK_Tyr_Ser-Thr 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2033 - - cam:101496142 882.478