Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2031 ATGTACTTGGCGATCACTGTTTATTGTGAGTCCAAAAAACATATCATCACTTGCACCATCCCTGAACCCCAACAAACTCTTAACAACATCATGGTGCAATCAAAGAAGTTTAGAGGTGTCAGGCAGCGCCATTGGGGTTCCTGGGTATCCGAAATTCGCCACCCACTTCTGAAGAGAAGGGTGTGGCTAGGGACATTTGAAACAGCAGAAGAGGCTGCTAGAGCCTATGATCAAGCTGCGATTCTGATGAGTGGGAGAAATGCCAAGACCAATTTCCCAATAACCCAAACTCCAGAAGGTGATCCAAAGAGCACTAACAGCGAGGACACTCCCTCCACCACCTCGAAGGATCTGGAGGAAATCTTACATGCAAAGCTTCGCAAATGTAGCAAGGTGCCTTCACCTTCTATGACTTGTTTGAGGCTTGACACAGAGAACTCACACATCGGAGTGTGGCAAAAGCGTGCTGGGAGGTGTTCTGATTCAAATTGGGTCATGACGGTTCAGCTGGGAAAGAAAACTGTTAATAATAATGAGACTCATCAAGCTGATAGTAGCAGTAGTAGTTCTCTTTCTTCTTCTCTACCTTCTTCTCAACATGACCACCATGAGTCTCCATCATTGAGTGTGGCAGGTAATCTTCATCACCATCAAGAAGTCGTGAGAGGAGAGATTGATGAAGAGGAGAGAATTGCCCTTCAGATGATAGAGGAGCTCCTCAACGACAGAAACTGCCCTAGCCCATCATTTGACAACAACATTCAAGAAAGGGATGGTGCTGATCATCATGACAACTTTTTTCTTTAA 807 0.4523 MYLAITVYCESKKHIITCTIPEPQQTLNNIMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSTNSEDTPSTTSKDLEEILHAKLRKCSKVPSPSMTCLRLDTENSHIGVWQKRAGRCSDSNWVMTVQLGKKTVNNNETHQADSSSSSSLSSSLPSSQHDHHESPSLSVAGNLHHHQEVVRGEIDEEERIALQMIEELLNDRNCPSPSFDNNIQERDGADHHDNFFL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2031 268 MobiDBLite consensus disorder prediction 90 112 - -
Gso11g2031 268 Pfam AP2 domain 36 84 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 MobiDBLite consensus disorder prediction 242 268 - -
Gso11g2031 268 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 MobiDBLite consensus disorder prediction 178 206 - -
Gso11g2031 268 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 31 253 - -
Gso11g2031 268 CDD AP2 35 95 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 Gene3D AP2/ERF domain 35 95 IPR036955 GO:0003700|GO:0006355
Gso11g2031 268 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Gso11g2031 268 MobiDBLite consensus disorder prediction 90 116 - -
Gso11g2031 268 MobiDBLite consensus disorder prediction 178 214 - -
Gso11g2031 268 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 31 253 - -
Gso11g2031 268 SUPERFAMILY DNA-binding domain 36 94 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2031 Gso-Chr11 35801182 35802790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2031 31 241 AP2-EREBP Transcription Factor Family AT1G15360 58.065 3.48e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso11g2031 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2031 - - gsj:114375848 534.258