Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2012 ATGATCATGGGACACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTCGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAATGTCTTCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTGCCATCTCATCGCTTCCACAGGCTTCTTCAGGTTCGCCGCTACGTTTATCATGATGTTGTTAGGTTGGAAGATCTTCAGAAACTCATTGATTGCTCCAACGTTCAGGCCTATACCATCAATAGTGCCAAAGTTGTGTTCATTAAGAAGAGACCCCAAAACCGGCAATTCAAAGGATCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTCCAAGAGCCTTTTATCCATTGCTCCCTTGGATGCAAGGTGGATTTTGTGCTGAAACACTATAAGGACCTCTCTCCCTACTTGAGGACATGCAACTCACTACAGCTAAGCCCTGATTTTCTGATCCCACAAGATATGGGGGATGAGGAAATGACTCGTTCAACCGTTGTGGATTGTGATGAGCCAATGAGCTCATCTTCTGGCTCATCAGAGTCAGAGAACAACATGAGCATGATGGCTTGCACAGAGATTGTTCGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAATAGCAATAAGGTTTCTGATGAAGACATGGCCACCAGCATGAGTAGAAGAAAAGGCATCCCTCATAGATCCCCTCTGTGTTAG 744 0.4556 MIMGHQKPAWLEALYTQKFFVGCSYHENAKKNEKNVFCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQDMGDEEMTRSTVVDCDEPMSSSSGSSESENNMSMMACTEIVRKRRSGWSTVCAKFMANSNKVSDEDMATSMSRRKGIPHRSPLC* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2012 247 Pfam PLATZ transcription factor 62 133 IPR006734 -
Gso11g2012 247 MobiDBLite consensus disorder prediction 228 247 - -
Gso11g2012 247 ProSiteProfiles Zinc finger B-box type profile. 23 61 IPR000315 GO:0008270
Gso11g2012 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 247 - -
Gso11g2012 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2012 Gso-Chr11 35617851 35619567 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso11g2012 PLATZ 4.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2012 - - gmx:100781564 509.22