Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2008 ATGTTGCGAGTGAAGGGAGGGAAGAGACCACCTTGGGTGGGACTTGGAGCTGCAGTGTGGGTTCAGATTGCTTCAGGAAATGGCTACTGTTTCCCTCTTTATTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACCCTGCTTGGTGTTGCCAATGATATTGGTGAAAATGTTGGCATTCTTCCCGGTCTCGCCTGCAACAAGTTCCCTCCTTGGCTCATTCTCTTCATCGGTGCTCTTTTTTCTTTCCTTGGTTTTGGGGTTCTCTGGCTTGCTATCACTAAAACACTTGATTCTCTTCCCTTCATCTTGCTATGGTTTGCACTAGCTGTTGGTACTAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCGGGAATCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACTCAAATTTACAGCGTGGTTTTTCACAATTCTTCATCCAAGTTCCTTTTATTTCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGTACTCCTGCTTCTGGTGAAGATTCTGCTGAAAAAGGGCATTTTTTGTTTATCCAAGGTGCTAGTGTGGCAATGGGTTTATATATTCTTGCTACAACAATACTTGACAACTTTATCCACATAAGTGACAGTGTTTCATATGCTTTGTTGGCCGTGATGATTCTCCTTCTCTTGGCTCCACTTGTTATCCCTACAAAGATGACACTATGTCCCAGAAAAGCCTCTAACACAGAAACCCCTGAGGAACATGTTGGATCTTCAGACTTTCTGGTTCAAGATGGCAAAGACAACATAGAGCCATTGCTATCATCTTCATCAGCTAGTGGTCTTGGAAGTTTTAATGATGTGGTGGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGAGCAGTGAGGAAGAAGAGAAGGCCCAAAAGAGGGGAAGATTTTAAGTTTACTGAGGCTCTAGTTAAGGCAGATTACTGGTTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTTCTTAATAATCTGGCTCAAATAGGCATTGCACAAGGTATGGAAGATACAACAAACTTGCTGTCACTTTTCAGTTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGGACAAATACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATCTTCTCGTACCTTGTGTTTGCCTATGCCATCAAAGGAACCCTTTATCCTGCAATTGCAATTCTTGGTATCTGCTACGGCGTGCAGTTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAAGACTTCGGTCTATTGAGCAACTTCATGGCTTTGGGGAACCCACTTGGTGCATTTCTTTTCTCTGCTCTTCTAGCAGGACATATATACGACAATGAGGCAGCAAAACAACACGGTGTAGGCCTCATTGCTTCAAGTGTTGCATGCATGGGTCCAAATTGTTTCAAGCTAACCTTTTTGACTCTGGCTGGTGTGTGTGTTGCGGGAACCATCTCCAGCATTATCTTGACCGTAAGAATTAAGCCCGTTTACCAAATGCTTTATGCCGGGGGTTCTTTTAAGCTACCTCAAACTTCAGGCCAGTAA 1716 0.433 MLRVKGGKRPPWVGLGAAVWVQIASGNGYCFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGALFSFLGFGVLWLAITKTLDSLPFILLWFALAVGTNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTQIYSVVFHNSSSKFLLFLAIGIPALCFSTMFLVRPCTPASGEDSAEKGHFLFIQGASVAMGLYILATTILDNFIHISDSVSYALLAVMILLLLAPLVIPTKMTLCPRKASNTETPEEHVGSSDFLVQDGKDNIEPLLSSSSASGLGSFNDVVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTNLLSLFSFFNFVGRLGGGVVSEYFVRTNTIPRTIWMTCTQIIMIFSYLVFAYAIKGTLYPAIAILGICYGVQFSIVIPTVSELFGLKDFGLLSNFMALGNPLGAFLFSALLAGHIYDNEAAKQHGVGLIASSVACMGPNCFKLTFLTLAGVCVAGTISSIILTVRIKPVYQMLYAGGSFKLPQTSGQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2008 571 CDD MFS_Mch1p_like 10 540 - -
Gso11g2008 571 Pfam Nodulin-like 11 257 IPR010658 -
Gso11g2008 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 570 - -
Gso11g2008 571 Gene3D MFS general substrate transporter like domains 348 554 IPR036259 -
Gso11g2008 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Gso11g2008 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 570 - -
Gso11g2008 571 SUPERFAMILY MFS general substrate transporter 233 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2008 Gso-Chr11 35571015 35574483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2008 2 571 Nodulin-like Gene Family AT1G80530 56.119 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2008 - - gmx:100808992 1074.69