Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1995 ATGGGAGCAGTGATTCTCCCAGATCTCGGCACCGAGATTTTGATTCCGGTCTGCGCCATCATTGGAATAGGGTTCGCCCTCTTCCAGTGGGTCCTCGTCTCCAAGGTTAAGCTCTCCGCTGCCAGAGACGCTTCCCCTAACGCCGCCGGCAAAAATGGCTACAACGATTACCTCATCGAAGAAGAGGAAGGCCTCAACGATCACAACGTTGTCCTCAAATGCGCCGAAATCCAAAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTCACTGAATACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTATTCCTTGGCTCTGTGGAAGGATTCAGCACGAGCTACCAGCCTTGCACCTATGATCAAACTAAAATGTGTAAGCCAGCTCTTGCTACTGCTGTTTTCAGCACCATATCTTTCCTGCTTGGCGGTGTCACATCGCTTATTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGGAAGGCTTTCATTACGGCTTTTAGATCTGGTGCAGTTATGGGTTTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGAAAGGTTGAAAGAAACATCCCCGAAGATGATCCAAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGATAATGTTGGGGATATCGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCCGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGGTGAATCATGAGTTGACTGCTATGTTATACCCTCTCATTATCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACAACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTAAAGGAGATTGAGCCTGCATTGAAGAAACAACTCATCATTTCCACTGCCCTGATGACTATTGGGATTGCAATTGTTAGTTGGATTGCACTCCCAACTTCCTTCACTATCTTCAATTTTGGAGTTCAGAAAGATGTCAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGTCTTATTATTGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGTCCGGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATTTTTGCTATTGCCATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCTGTTGCTGCGCTTGGCATGCTGAGTACCATTGCCACCGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAAATGGCTGGTATGAGTCACAGAATTAGAGAGAGAACTGATGCCCTTGATGCTGCCGGAAACACGACTGCCGCTATTGGGAAGGGATTTGCCATTGGTTCTGCTGCCCTTGTATCACTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCTATGACTATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAAGAAGTACGCAGGCAATTCAACACCATTCCAGGGTTGATGGAGGGAACTGCTAAGCCTGACTATGCCACATGTGTTAAGATCTCCACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCGCTTGTTGTTGGAATCCTTTTTGGTGTTGAAACACTTTCTGGTGTCCTAGCTGGATCTTTGGTGTCTGGTGTACAGATTGCTATTTCTGCATCCAACACCGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATTGTCACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTAAAGGATACATCTGGACCTTCACTTAACATCCTTATTAAGCTCATGGCGGTTGAGTCTCTTGTGTTTGCTCCCTTCTTTGCTACACATGGTGGCCTACTCTTCAAGATCTAA 2298 0.4534 MGAVILPDLGTEILIPVCAIIGIGFALFQWVLVSKVKLSAARDASPNAAGKNGYNDYLIEEEEGLNDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSYQPCTYDQTKMCKPALATAVFSTISFLLGGVTSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLIISSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIVSWIALPTSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1995 765 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gso11g1995 765 Pfam Inorganic H+ pyrophosphatase 43 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gso11g1995 765 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 765 - -
Gso11g1995 765 PIRSF H+-PPtase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gso11g1995 765 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gso11g1995 765 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1995 Gso-Chr11 35475893 35480599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1995 5 629 Primary Pumps ATPases AT1G15690 87.739 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1995 K23025 - gmx:100775864 1467.98