Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1987 ATGGCTTTCACTGCATTATCCTTGGTGCTGTTGCTGCAACTGTCAACAATTTTTGGCTCCGAGGTTGTCTTACAGTCAAAGGATTGTGGCTCTGATTGGGTGGCGCATTCATATTCTAGTCATGGTCAGGATCTGTTCTACATAAACGGCAATGTAGTAAACAAAGTTGCTTTCTGTGAGGCTCTCAAATTGTATATTGCAAAGGGGTGTGATGTGAAGGACTACTTTGGAAGTGTCAAATGTGTGATGGATGACTCTTTTGTGACTTTACCTTTAAAGGCAGGGAGGAAACTTTTGAAGGATTTGAGCAGTGAATCCACACCACAGAGAGATTCTAAGCCTATGTCATCCAACGTAGTTGTTATTGGTGCAGGGGGAGCTTTGTTGGTGTGTTGTGCTGTTCTTTGTCCTTGTTTCTATGCCAAGAGACGTAAAGCAACTTCTCATGCTGTTCTGTCCAAGGACCCAAATTCAATGGATTCGGTTTCCTCCGAAGCCTCCGTTAATGATAAGATTCCTGCCAGTCCACTTCGGGTGCCGCCTAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCACTAGACTTCAATCATTGCATCTCAATCTGAACCAAGTTACAAGAGCTACCCAAAACTTCTCAGAAACATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCCAAGTTGGAAGATGGCCTGGTTGTGGCTGTAAAACGTGCAAAGAAGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAGTGAAATTGAACTTTTGGCCAAAATTGATCATCGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAATGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTACCCTTAGAGAACATTTGGATGGTATGCGTGGAAAAATCCTAGACTTCAATCAACGCCTCGAAATTGCAATTGATGTTGCTCATGGCTTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCTAGGACCAGTGAACACTGATCAGACACACATTTCAACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCCGAGTATATGAAAACATACCAACTCACTCCCAAGAGTGACGTTTATTCATTTGGAATTTTGCTTTTAGAAATTGTGACAGCCCGCCGTCCTGTTGAGTTGAAGAAAACTGTTGCAGAGCGGGTTACACTCAGATGGGCCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTTGTGGATCCTTTAATGGAAGAAGCTGTAAACGGAGATGTTCTGATGAAAATGCTTGATTTGGCGTTTCAATGTGCAGCCCCCATTCGAACAGATAGACCTGACATGAAATCAGTGGGCGAGCAATTGTGGGCAATAAGGGCAGATTACCTCAAGAGTGCAAGGAGATAA 1494 0.4264 MAFTALSLVLLLQLSTIFGSEVVLQSKDCGSDWVAHSYSSHGQDLFYINGNVVNKVAFCEALKLYIAKGCDVKDYFGSVKCVMDDSFVTLPLKAGRKLLKDLSSESTPQRDSKPMSSNVVVIGAGGALLVCCAVLCPCFYAKRRKATSHAVLSKDPNSMDSVSSEASVNDKIPASPLRVPPSPSRFSMSPKLTRLQSLHLNLNQVTRATQNFSETLQIGEGGFGTVYKAKLEDGLVVAVKRAKKEHFDSLRTEFSSEIELLAKIDHRNLVKLLGYIDKGNERLLITEFVPNGTLREHLDGMRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTARRPVELKKTVAERVTLRWAFRKYNEGSVVELVDPLMEEAVNGDVLMKMLDLAFQCAAPIRTDRPDMKSVGEQLWAIRADYLKSARR* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1987 497 MobiDBLite consensus disorder prediction 151 170 - -
Gso11g1987 497 Gene3D Transferase(Phosphotransferase) domain 1 289 496 - -
Gso11g1987 497 MobiDBLite consensus disorder prediction 151 185 - -
Gso11g1987 497 PANTHER OS07G0166700 PROTEIN 8 496 IPR045272 GO:0004714|GO:0006468
Gso11g1987 497 CDD STKc_IRAK 218 484 - -
Gso11g1987 497 SMART serkin_6 212 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1987 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Gso11g1987 497 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 8 496 - -
Gso11g1987 497 Pfam Protein tyrosine and serine/threonine kinase 217 484 IPR001245 GO:0004672|GO:0006468
Gso11g1987 497 SUPERFAMILY Protein kinase-like (PK-like) 194 487 IPR011009 -
Gso11g1987 497 Gene3D Phosphorylase Kinase; domain 1 183 288 - -
Gso11g1987 497 ProSitePatterns Protein kinases ATP-binding region signature. 218 244 IPR017441 GO:0005524
Gso11g1987 497 ProSiteProfiles Protein kinase domain profile. 212 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1987 Gso-Chr11 35390834 35395365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1987 120 488 Receptor kinase-like Gene Family AT3G46290 40.267 2.44e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gso11g1987 PK_Tyr_Ser-Thr 9.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1987 - - gmx:100798260 913.679