Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g1905 | ATGATACTGCAGCAGATTATTAAGCTCCTGACCTTAACTTTGATATGGTGGAGCAGTATTAATGTTGAATGTGCAGTTGCGGGGACACGCGACACACGTGTGATAAACTCTGGATGCAGCACAATCAACGCTTCCAACCCGGGTAGTTTCTTTGGGAATGTCAATGAGACAATCTCAGAGCTGAGAGGAGAAATTAGGAACCAAAGCTTGCACTTTGGCACATCATTGAAATCCAAAGGAGATGTCAATACATATACTATGTTTCAATGCAGAAACTATCTCTCCAGAAATGACTGTCTTGCTTGCATCAACACTGCCTCCACCCAAATCCGGGATATATGCAAAAAAGCCAACGGCGCAAGACTCATCTACAATGACTGCTTCCTCAGGTATGAGAGTGAGAGGTTCTACCAACAGACCAACGAAATCGGTGGTGGGGTAACATGTGGGAACAAGAGCACAAATGCCACAGGTTTTAGAGAAGTTGGACAACAAGCACTACTGGACCTACAAAAAGCAACACCTAAAATTAAAGGTTTCTATGCAGCTACTAAGACACAGGTGGCTGGTGGTAGTGCAAATATTTATGCCATTGCACAGTGTGTTGAAACTGCTTCCCCACAGAAATGCCTGGATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGCCTTCCCAGCACAGATGGTTCAGCATATGATGCTGGCTGTTTCATGAGATTCTCCACCACACCGTTCTTTGCTGATAATCAAACCATTAATATCAGACCCTATTTAAAAGAAGGAGGTTCAAGCAAGAAGTGGGCCATTATAGGTGGCGTCGTAGGAGGTGTTGTTCTCCTCCTTGTGTTGTTTGCCTGGAGATTGTTTACAAAACCAAAGAGAGCTCCCAAAGCTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAGCTTCAAGTATAAAGATTTGAAAGCTGCAACAAAAAATTTCAGTGCTGATAATAAACTTGGAGAAGGAGGTTTTGGTGCTGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCTGTGAAGAAACTAATGTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGCAGAGGCCCCGAGAGAATCCTAGTTTATGAATATATGGCAAATAGCAGCCTTGACAAATTCTTATTTGGTTCCAAAAAAGGTTCCCTCAATTGGAAACAACGTTATGATATAATTTTGGGCACAGCAAGGGGACTAGCATATCTACATGAGGAGTTCCATGTGTCCATCATTCATAGAGATATAAAGACCGGTAATATCCTTCTAGATGATTATCTCCAGCCCAAAATTGCAGATTTTGGGTTGGCAAGGCTTTTGCCAAGGGATCGTTCACATCTCAGCACAAAATTTGCTGGAACACTGGGATACACAGCACCTGAATATGCAATGCAAGGTCAATTATCAGAGAAAGCCGATACCTACAGTTATGGTATTGTGGTCCTAGAAATCTTAAGTGGTCAAAAGAGTACCAATGTAAAGGTTGATGACGAGGGTCGCGAGTACCTTCTTCAACGAGCATGGAAACTGTATGAGAGAGGCATGCAGTTGGAGCTTGTGGACAAGGACATAGACCCCAATGAATATGATGCAGAAGAAGCGAAGAAAATCATTGAAATTGCTTTATTATGCACTCAAGCATCAGCTGCAGCCAGGCCAACAATGTCTGAATTAATAGTTCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTTCGACCAACTATGCCGGTGTTTGTTGAAACGAATATGATGAATCAGGAAGGTGGCAGCTCTCCTGGTACATCTAATGCTACTATCTCCATTTCCGTTCTATCGGCCAGATGA | 1929 | 0.4241 | MILQQIIKLLTLTLIWWSSINVECAVAGTRDTRVINSGCSTINASNPGSFFGNVNETISELRGEIRNQSLHFGTSLKSKGDVNTYTMFQCRNYLSRNDCLACINTASTQIRDICKKANGARLIYNDCFLRYESERFYQQTNEIGGGVTCGNKSTNATGFREVGQQALLDLQKATPKIKGFYAATKTQVAGGSANIYAIAQCVETASPQKCLDCMQVGYNNLQSCLPSTDGSAYDAGCFMRFSTTPFFADNQTINIRPYLKEGGSSKKWAIIGGVVGGVVLLLVLFAWRLFTKPKRAPKADILGATELKGPVSFKYKDLKAATKNFSADNKLGEGGFGAVYKGTLKNGKVVAVKKLMLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSRGPERILVYEYMANSSLDKFLFGSKKGSLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDYLQPKIADFGLARLLPRDRSHLSTKFAGTLGYTAPEYAMQGQLSEKADTYSYGIVVLEILSGQKSTNVKVDDEGREYLLQRAWKLYERGMQLELVDKDIDPNEYDAEEAKKIIEIALLCTQASAAARPTMSELIVLLKSKSLVEHLRPTMPVFVETNMMNQEGGSSPGTSNATISISVLSAR* | 643 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g1905 | 642 | Pfam | Protein tyrosine and serine/threonine kinase | 327 | 595 | IPR001245 | GO:0004672|GO:0006468 | |
Gso11g1905 | 642 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 401 | - | - | |
Gso11g1905 | 642 | ProSiteProfiles | Protein kinase domain profile. | 325 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1905 | 642 | Gene3D | Transferase(Phosphotransferase) domain 1 | 402 | 608 | - | - | |
Gso11g1905 | 642 | ProSiteProfiles | Gnk2-homologous domain profile. | 32 | 136 | IPR002902 | - | |
Gso11g1905 | 642 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 446 | 458 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g1905 | 642 | Gene3D | Single helix bin | 259 | 291 | - | - | |
Gso11g1905 | 642 | Gene3D | - | 147 | 246 | IPR038408 | - | |
Gso11g1905 | 642 | Gene3D | - | 31 | 136 | IPR038408 | - | |
Gso11g1905 | 642 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 14 | 638 | - | - | |
Gso11g1905 | 642 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 14 | 638 | - | - | |
Gso11g1905 | 642 | CDD | STKc_IRAK | 331 | 598 | - | - | |
Gso11g1905 | 642 | SUPERFAMILY | Protein kinase-like (PK-like) | 308 | 597 | IPR011009 | - | |
Gso11g1905 | 642 | ProSiteProfiles | Gnk2-homologous domain profile. | 141 | 246 | IPR002902 | - | |
Gso11g1905 | 642 | SMART | serkin_6 | 325 | 603 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1905 | 642 | Pfam | Salt stress response/antifungal | 42 | 133 | IPR002902 | - | |
Gso11g1905 | 642 | Pfam | Salt stress response/antifungal | 149 | 243 | IPR002902 | - | |
Gso11g1905 | 642 | ProSitePatterns | Protein kinases ATP-binding region signature. | 331 | 354 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g1905 | Gso-Chr11 | 33804902 | 33808691 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g1905 | 26 | 642 | Receptor kinase-like Gene Family | AT1G70520 | 36.407 | 1.45e-127 | 389 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Gso11g1905 | Pkinase | 1.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g1905 | - | - | gmx:100305452 | 1251.5 |