Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1904 ATGCTAATGCTACATAGACTTCTTGCTTATGAGTACATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAGTTTGTGTTGGATTGCGATACAAGGTATAATATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGCGAGTCAAACATTATTCATTGTGACATCAAACCAGAAAACGTGCTCCTAGATGATACTTTCAGGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACGTGAACAAAGCCATGTGTTCACAACACTTAGAGGCACTACAGTGTATCTTGCACCTGAGTGA 330 0.3909 MLMLHRLLAYEYMANGSLDKWIFNKNKEEFVLDCDTRYNIALGTAKGLAYLHEDCESNIIHCDIKPENVLLDDTFRVKVSDFGLAKLMTREQSHVFTTLRGTTVYLAPE* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1904 109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
Gso11g1904 109 Gene3D Transferase(Phosphotransferase) domain 1 13 109 - -
Gso11g1904 109 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 109 - -
Gso11g1904 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1904 109 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 109 - -
Gso11g1904 109 SUPERFAMILY Protein kinase-like (PK-like) 5 109 IPR011009 -
Gso11g1904 109 Pfam Protein kinase domain 5 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1904 Gso-Chr11 33747722 33748051 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1904 6 109 Receptor kinase-like Gene Family AT5G20050 51.376 1.88e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso11g1904 Pkinase 7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1904 - - gmx:100790029 226.483