Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1833 ATGGCAGAGGCTAATGTAGTGCTGTTGGATTTCTGGCCAAGCTCTTATGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGAATCTCATATGAGTGCAAGCAAGAAGACTTGGAAGCTAGAAGCTCTCTGCTTTTAGAGATGAACCCGGTTCACAAAATGATACCAGTTTTGATTCATAATGGAAAACCCATCTGCGAATCACTCAACATTGTTCAGTACATTGATGAGACATGGAACCACAAACCTTCTTCTCTCCTTCCATCTGATCCTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATGCTGTGAAGAGGGTATGGACAGGGAAGGGTAAAGAACAAGAAGAGTTCAAGAAACAATTTATACAATGCTTGAAGACCTTGGAATATGAACTTGGAGACAAGCCATATTTTGGTGGTGAGGACTTTGGGTATGTGGATGTGGCTCTTGTTCCCTTCACTAGCTGGTTTTACACGGTTGAGACTTGTGGGAAACTAAGCATTGAGAAAGAGTGTCCCAAACTCATGGCTTGGGCCAAGAGGTGCATGGAAAAAGAGAGTGTGGCCACGTCACTCCCTCACCCTCACCAGATCTATGCCTTTGCAATGCAATATAAACAGAGACATGGACTTGAGTAG 666 0.4354 MAEANVVLLDFWPSSYGMRVKIALAEKGISYECKQEDLEARSSLLLEMNPVHKMIPVLIHNGKPICESLNIVQYIDETWNHKPSSLLPSDPYKRSQARFWGDYIDKNVYNAVKRVWTGKGKEQEEFKKQFIQCLKTLEYELGDKPYFGGEDFGYVDVALVPFTSWFYTVETCGKLSIEKECPKLMAWAKRCMEKESVATSLPHPHQIYAFAMQYKQRHGLE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1833 221 SUPERFAMILY GST C-terminal domain-like 77 218 IPR036282 -
Gso11g1833 221 Pfam Glutathione S-transferase, C-terminal domain 124 190 - -
Gso11g1833 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Gso11g1833 221 Gene3D Glutaredoxin 1 89 - -
Gso11g1833 221 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Gso11g1833 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Gso11g1833 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 217 - -
Gso11g1833 221 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Gso11g1833 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 217 IPR045073 -
Gso11g1833 221 CDD GST_N_Tau 6 79 - -
Gso11g1833 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
Gso11g1833 221 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Gso11g1833 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Gso11g1833 221 Gene3D - 90 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1833 Gso-Chr11 32110961 32112471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1833 6 217 Glutathione S-transferase Gene Family AT1G78380 59.434 5.45e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1833 K00799 - gmx:100527221 453.751