Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1832 ATGAAAGACACAATGGAAACTCCTACGACACTCACCACCTTGCTCCGCCACGTCGCCGCCAAATTCCCCTCCCGCCGTGCCATCTCCGTCGCTGCCAAATTCGACCTCACCCACTCCCGCCTCCACCGCCTGGTCGAATCCGCCGCCGCTCAGTTAGTCGCCGCCGGCGTCAAACCCGGCGACGTCGTCGCCCTCACCTTCCCCAACACCATCGAGTTTGTAGTCATGTTCCTAGCCGTCATTCGGGCTCGAGCCACAGCCGCGCCGTTAAACTCGGCTTACACAGCGGAAGAGTTCGAGTTTTACTTATCCGACTCGGAGTCCAAGCTCCTCCTAACATCACCAGAAGGAAACAAGCCTGCTCAAGCCGCGGCTTCAAAGCTCAGCATCCCCCACGCCACGGCTTCGATTACCAAAGCCGAGAACGAAGAAGCGGAGCTGAGTCTCTCATTATTAAACCACCCCGAGTTGAATTCCGTTAACTCAGTTGAGTCACTCGTTAACGACCCTGATGACGTGGCACTTTTCCTTCACACCTCTGGCACCACGAGCCGTCCCAAGGGAGTGCCGCTGACTCAGTACAACCTTCTCTCTTCGGTGAAGAACATCGACTCAGTGTACCGACTCACTGAGTCCGACTCGACGGTGATTGTTCTTCCGCTCTTCCACGTGCATGGGTTAATCGCCGGATTGCTGAGCTCCCTCGGCGCCGGAGCTGCGGTAGCGCTGCCGGCGGCGGGGAGGTTCTCCGCCTCGGCGTTTTGGAAGGACATGATTAAATACAGCGCCACATGGTACACCGCGGTTCCCACCATACACCAGATCATACTGGATCGCCACTCCAGCAACCCCGAACCGGTTTACCCGCGGCTCCGGTTCATCCGAAGCTGCAGCGCCTCGCTCGCACCGGTTATACTCGGTAAACTCGAGGAGGCTTTCGGTGCACCGGTTTTAGAGGCCTATGCGATGACGGAAGCGTCGCATTTGATGGCTTCGAACCCTTTGCCACAAGATGGGGCCCACAAGTCCGGGTCGGTTGGGAAACCCGTGGGTCAGGAAATGGGTATTTTAGACGAATCGGGTCGGGTCCAAGAGGCTGGTATCAGTGGAGAGGTTTGCATTCGGGGACCCAATGTTACGAAAGGATATAAAAATAACGTGGCAGCAAATACGGCGTCGTTTCTGTTCGATTGGTTTCATACTGGTGATATTGGATACTTTGATTCTAATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAGGTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCTTCTTTCACATCCAGAAATTGCTCAAGCAGTTGCTTTTGGAGTGCCTGATGCCAAGTATGGAGAGGAGATATATTGTGCTGTCATCCCAAGAGAAGGATCAAACGTTGATGAGGCAGAGGTGCTAAGATTTAGCAAGACCAATCTTGCATCCTTCAAAGTACCAAAAAAGGTCTTCATTACTGATTCTTTACCCAAAACTGCCACAGGCAAGATTTTGCGCCGTCTTGTGGCAGAACACTTTGTCTCTCAAATTTGA 1572 0.5337 MKDTMETPTTLTTLLRHVAAKFPSRRAISVAAKFDLTHSRLHRLVESAAAQLVAAGVKPGDVVALTFPNTIEFVVMFLAVIRARATAAPLNSAYTAEEFEFYLSDSESKLLLTSPEGNKPAQAAASKLSIPHATASITKAENEEAELSLSLLNHPELNSVNSVESLVNDPDDVALFLHTSGTTSRPKGVPLTQYNLLSSVKNIDSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASAFWKDMIKYSATWYTAVPTIHQIILDRHSSNPEPVYPRLRFIRSCSASLAPVILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGAHKSGSVGKPVGQEMGILDESGRVQEAGISGEVCIRGPNVTKGYKNNVAANTASFLFDWFHTGDIGYFDSNGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDAKYGEEIYCAVIPREGSNVDEAEVLRFSKTNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1832 523 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
Gso11g1832 523 Gene3D - 9 418 IPR042099 -
Gso11g1832 523 SUPERFAMILY Acetyl-CoA synthetase-like 8 521 - -
Gso11g1832 523 PANTHER OXALATE--COA LIGASE-LIKE 5 523 - -
Gso11g1832 523 CDD FACL_fum10p_like 23 517 IPR045310 GO:0016874
Gso11g1832 523 Pfam AMP-binding enzyme 16 425 IPR000873 -
Gso11g1832 523 Gene3D - 419 521 IPR045851 -
Gso11g1832 523 Pfam AMP-binding enzyme C-terminal domain 434 509 IPR025110 -
Gso11g1832 523 PANTHER ACYL-COA SYNTHETASE 5 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1832 Gso-Chr11 32002855 32005876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1832 9 523 Monolignol Biosynthesis Gene Families AT4G05160 30.132 2.61e-57 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1832 K22133 - gmx:100817853 966.837