Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1831 ATGGGTTCCGACATTTGCGTTGTGAATGGTTCGTGCACTCACGAATGGAGAAAGGGGTGGCCTCTGCGATCTGGTGGATTCGCTCAACTATGCTGCAAGTGCGGATTTATGGAGGAGTGGAAGGGTGACATCCTTGACCGGTTATCTGCCTACGAGAATTCAGTTTTCTGTAATAAATTCCACCGCCAACAAACTGGTTGGAGGGAGTGTAACTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCTAGATCTTTGTTCGGGTATCTTGACTTTGGTGGCATAGGTTGTGTCAGCTGTGTAAATACTACCCAACTTAGTATGATGAGGAATACTGAAAATCCAAATGTGTCAGTTTCGTCAATAAAAAATAATGCGAGTGATCGGCATTCTGCTCATTTTGATGGAAGACTGCTTGTGGGTGGTGTTGATGAAGGAAAACTTATGCAATTCTGCAAAATTATTGAAGCTAGTGAATCCAGCCACTGGAATCATGCTCAAAGTGATGGCATAATTGCACATCATGGGCAAAACAACCAAGAAGCCAAGTGTTCATTCAGGGAAGGGGACATTGGATTTTCAAATGTGAGGAAACCATCCGTTCAGTCATTGACATTTGCTACGTTAGAAAATAATAGGTCAACATGGGAGATTAAAAACATGCATGAATCAAATGCACAGCCATCTTTCAGTATGTATCTGGGAAATGCATCAGGGAACGACTCCGTCCCACCTTCTGCTGGAGAGGCTGTAGAAGGAAGACTCGAGGGAAAAACATCTCCTCCCTTTCAAAGATCTCGCCCTATATGTCCTAAACCATTGAAGAGTGGGCTTACCATGAATGTGGAGACAGATAAAGGTGCAATTTCTCAATCACGTGTTGCTCGGCCACCTGCAGATGGCAGGGGCAAGAATCAGTTACTTCCCCGATATTGGCCGAGGATTACTGATCAAGAGCTGGAGCGATTGGCTGGAGATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGTTGAGTGCCAGTGACGCAGGTCGAATTGGCCGTCTTGTTCTCCCAAAAGCCTGTGCTGAGGCATATTTTCCTCCTATTTCACAATCTGAAGGTGTTCCTTTGCGAATGCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGCAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCCATGCAATTATGTGCTGGTGATACTGTAACATTTAGTCGGATAGATCCTGGAGGCAAACTAGTTATGGGTTTCAGAAAAGCATCAAATTCTACAGATACACAGGATGCCTCCACATCTGCACAATCTAATTCAGCAAAGGGAACCATCTCTTCTGGTACTGAGAATCTGCCATCAGGAAGTAATCATGCCAATCTTCTCCATTCATTGACAGGGAATGTTGAAACTCACTTAAATGGACATACAGAACATCTGCACTTGGGTACTGGAACTGCTGGATTGCTTAAAACTGAAAATAATGAGATGACAAACAGCAGTTCACCACAACAACAAATTTCGGTTTTAGAGAAGAAGAGGACTCGCAATATTGGGCCTAAAAGTAAGAGGTTGCTAATTGATAATGAAGATGCCATGGAGTTGAAACTTACATGGGAAGAAGCACAAGATTTGCTTCGTCCTCCTCCTAGTGTCAAGCCAAACATTGTCACAATTGAGGACCAAGTATTCGAAGAATATGATGAACCCCCTGTTTTTGGAAAGAGAACTATATTCAGTGCCTGTTCATCTGGGGGGAAGGAACAATGGGCTCAGTGTGATGATTGCTCTAAATGGCGAAAGCTGCCCGTTGATGCTCTTCTTCCTCCCAAGTGGACATGTTCTGAAAATGTTTGGGATTCAAGCAGGTGTTCATGCTCTGTGCCGGAGGAGTTAAGTTCAAAGGAATTAGAAAATCTTCTGAAAACCAACAAAGATTTTAAAAAGCGGCGAATTGCAGAAAGCAGCAAGTCAATCCAAGAACACGAGGCTTCTGGCCTGGATGCCCTTGCCAGTGCAGCTGTCCTTGGAGAAAATCTTGTTGACACTGCCGAGTCATCAGCTGGAGCCACCACCAAACATCCTAGACACCGTCCCGGCTGCTCTTGCATCGTATGCATTCAGCCACCAAGTGGAAAGGGGAGGCATAAGCCAACCTGTACGTGCAACGTGTGCATGACCGTGAAGCGCCGGTTCAAAACCCTCATGCTAAGGAAGAAGAAACGGCAATCTGAACGCGAAGCAGATACTGCCCAAAAAGACCAAACTCTCCTGAAAGATGAGCCGGATACCAACGGAGCACCGAGGGACGATACAAGTCGGTTGGAGAAAGAGGTGGGACTAAACAAAAGTCAACATCAGGTGGGTGAGTCCAGTACTGGACAGATCGATCTGAATTCTCATCCCAACCGCGAAGACATGCAAGTGGAAACCACAGGACTTAACATGTCTAGTCATCTTGAACCAGCAACAAACCATACAGTAGGAGAATTTATGGACAAAAATGACCTAAGAAGAAGCTTCAATAATGAAGTGCAGACTGGTCAGAATTCTTCTTTGCACACTCCTCCTCAATCTAGTGGAGAAGGTCAGAGATACTTCTCTGATGGAAGATGCTTTGCATCCATTGTGTGGAACCAGGAAAGAAAGGATGAGGTACATAGTCAACCCAATCAGAGTCAAAACAATCTTTCTTAA 2736 0.4463 MGSDICVVNGSCTHEWRKGWPLRSGGFAQLCCKCGFMEEWKGDILDRLSAYENSVFCNKFHRQQTGWRECNFCNKPIHSGCIVSRSLFGYLDFGGIGCVSCVNTTQLSMMRNTENPNVSVSSIKNNASDRHSAHFDGRLLVGGVDEGKLMQFCKIIEASESSHWNHAQSDGIIAHHGQNNQEAKCSFREGDIGFSNVRKPSVQSLTFATLENNRSTWEIKNMHESNAQPSFSMYLGNASGNDSVPPSAGEAVEGRLEGKTSPPFQRSRPICPKPLKSGLTMNVETDKGAISQSRVARPPADGRGKNQLLPRYWPRITDQELERLAGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGVPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLCAGDTVTFSRIDPGGKLVMGFRKASNSTDTQDASTSAQSNSAKGTISSGTENLPSGSNHANLLHSLTGNVETHLNGHTEHLHLGTGTAGLLKTENNEMTNSSSPQQQISVLEKKRTRNIGPKSKRLLIDNEDAMELKLTWEEAQDLLRPPPSVKPNIVTIEDQVFEEYDEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDSSRCSCSVPEELSSKELENLLKTNKDFKKRRIAESSKSIQEHEASGLDALASAAVLGENLVDTAESSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADTAQKDQTLLKDEPDTNGAPRDDTSRLEKEVGLNKSQHQVGESSTGQIDLNSHPNREDMQVETTGLNMSSHLEPATNHTVGEFMDKNDLRRSFNNEVQTGQNSSLHTPPQSSGEGQRYFSDGRCFASIVWNQERKDEVHSQPNQSQNNLS* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1831 911 MobiDBLite consensus disorder prediction 239 276 - -
Gso11g1831 911 CDD B3_DNA 334 435 IPR003340 GO:0003677
Gso11g1831 911 MobiDBLite consensus disorder prediction 438 469 - -
Gso11g1831 911 MobiDBLite consensus disorder prediction 797 816 - -
Gso11g1831 911 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 859 - -
Gso11g1831 911 MobiDBLite consensus disorder prediction 858 878 - -
Gso11g1831 911 SMART B3_2 336 437 IPR003340 GO:0003677
Gso11g1831 911 Gene3D - 314 441 IPR015300 -
Gso11g1831 911 ProSiteProfiles B3 DNA-binding domain profile. 336 437 IPR003340 GO:0003677
Gso11g1831 911 Gene3D - 600 656 - -
Gso11g1831 911 Pfam B3 DNA binding domain 336 435 IPR003340 GO:0003677
Gso11g1831 911 SUPERFAMILY DNA-binding pseudobarrel domain 334 436 IPR015300 -
Gso11g1831 911 MobiDBLite consensus disorder prediction 858 879 - -
Gso11g1831 911 ProSiteProfiles Zinc finger CW-type profile. 597 647 IPR011124 GO:0008270
Gso11g1831 911 MobiDBLite consensus disorder prediction 289 308 - -
Gso11g1831 911 MobiDBLite consensus disorder prediction 750 816 - -
Gso11g1831 911 Coils Coil 754 774 - -
Gso11g1831 911 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 859 - -
Gso11g1831 911 Pfam CW-type Zinc Finger 602 644 IPR011124 GO:0008270
Gso11g1831 911 MobiDBLite consensus disorder prediction 753 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1831 Gso-Chr11 31959246 31967772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1831 1 822 B3 DNA Binding Superfamily AT2G30470 49.641 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso11g1831 B3 1.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1831 - - gmx:100789848 1840.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1831 11 31959246 31967772 Gso11g1831 11 31959246 31967772 ECH