Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1821 ATGGCCACACAGACGCAAGATCCACCTTCAAACCCTAACCCTAATCCCAATGCCACGTCGGCAACGCCATCTTCCTCCTTCTTCTTCCGCGCCGGCGGCGCCAACGGCGCCTCCGTCGCTCCAGTCGCCGGCTCCGGCGAGTCACACTCGCACCACCGTAGAGCGCAGTCGGAGGTCAGTTTCCGGCTGCCGGAAGACATGATGGACCTCTCGCCGTCCGATCCGTTCAACGGCGGATCCTCTACGGCGAGCTTCGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAAAAGCTCAGCGGCGGCGCCAACGGCGCCGGCCGAGGCGGAAACGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGCACCAGCGGCCACAACGACGGCGAGAAGAGTTCGAGCGCCGCCGCAGCGCGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCCACGTCGACGTGCATGTTCGGAGAGATCATGGATGCGAAGAAAGCCATGCCTCCTGATAAGCTCGCGGAGCTTTGGAACATTGATCCAAAGCGTGCCAAAAGAATACTGGCTAATCGGCAATCTGCTGCGCGTTCAAAAGAAAGAAAGGCACGCTATATACAAGAACTTGAGCACAAAGTTCAGACCCTTCAGACTGAAGCTACAACACTATCTGCCCAACTTACATTGTACCAGAGGGATACAACTGGTCTGAGTTCTGAAAATACTGAGCTTAAGCTCCGTCTACAAGCCATGGAGCAACAAGCACAGCTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGAGAGGCATTGAACCAATCTGAGTCTTTTAATCTGGGAATGCACCAGATGCCATATGCAGGGTCAAATTTCTTTTCAATTCCACCACATTCAGGTCCTTCTGGGCACCAGAACATGCAATTGCCACCATTTGGTCACTCCCAATCCACCGTGCCGACTCATCAGCTGCAACAAACAAATTCTCACCAAATGTCAGATATATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTCGATATTAGTAGCAAAGGAACACCCATGGTGAAGTCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACCACATTTTGA 1158 0.5371 MATQTQDPPSNPNPNPNATSATPSSSFFFRAGGANGASVAPVAGSGESHSHHRRAQSEVSFRLPEDMMDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLSGGANGAGRGGNGSDQSGYGNGAGTSGHNDGEKSSSAAAARPRHRHSSSVDGSTSTCMFGEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELEHKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNQSESFNLGMHQMPYAGSNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLDISSKGTPMVKSEGPSISANESSTTF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1821 385 PANTHER BZIP TRANSCRIPTION FACTOR 1 382 - -
Gso11g1821 385 MobiDBLite consensus disorder prediction 1 89 - -
Gso11g1821 385 MobiDBLite consensus disorder prediction 17 31 - -
Gso11g1821 385 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 382 - -
Gso11g1821 385 MobiDBLite consensus disorder prediction 368 385 - -
Gso11g1821 385 MobiDBLite consensus disorder prediction 108 159 - -
Gso11g1821 385 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Gso11g1821 385 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700|GO:0006355
Gso11g1821 385 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700|GO:0006355
Gso11g1821 385 MobiDBLite consensus disorder prediction 114 137 - -
Gso11g1821 385 Gene3D - 186 239 - -
Gso11g1821 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
Gso11g1821 385 MobiDBLite consensus disorder prediction 308 342 - -
Gso11g1821 385 Coils Coil 203 230 - -
Gso11g1821 385 MobiDBLite consensus disorder prediction 358 385 - -
Gso11g1821 385 Pfam bZIP transcription factor 187 245 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1821 Gso-Chr11 31547595 31550925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1821 9 385 bZIP Transcription Factor Family AT2G40620 49.043 5.73e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g1821 bZIP_1 2.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1821 - - gmx:100775607 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1821 11 31547595 31550925 Gso11g1821 11 31547595 31550925 ECH