Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1814 ATGCAACTCAACTCAGATGTGAACCCAACTGTTAAGAATATTGATCAGGTAGATTCATGCAAGATTACTTCAGTGAAGTTCTCCTGTGCAAAAGAAGTTGTGTCGCTTCATTCACGGAAAAGTATGGAAATAGTTGTGATACGGGATTTCGATAGAGAAAACTATGTTGAGTTTATGTATGGAAAAACTAGATTAGTATTAGGGAAGATGTTATGTGTTGGTTATGTTCTTGTTAAGGGGCTAGAAGATCCCATAAGGAGCAAGTATAAACTTATGCTAAGTTGTTCACTTATTGTTACTTTTGTGATTCCTCCTGAGTTACCAATGGAATTATCAATAGTTGTTAATACTTCCCTGACTGCACTGGCACGGCATGACATTTTTTGCACAGAGCCTTTTCGAATACCATTTGTCAGAAAGGTTGATATATGTTGTTTTGACAAGACATGGACACTTACATCTAATGACATGATTCTGAAGCTGCGGTAG 489 0.3701 MQLNSDVNPTVKNIDQVDSCKITSVKFSCAKEVVSLHSRKSMEIVVIRDFDRENYVEFMYGKTRLVLGKMLCVGYVLVKGLEDPIRSKYKLMLSCSLIVTFVIPPELPMELSIVVNTSLTALARHDIFCTEPFRIPFVRKVDICCFDKTWTLTSNDMILKLR* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1814 162 PANTHER CATION-TRANSPORTING ATPASE 65 159 - -
Gso11g1814 162 PANTHER CATION-TRANSPORTING ATPASE 11 69 - -
Gso11g1814 162 PANTHER CATION-TRANSPORTING ATPASE-RELATED 11 69 - -
Gso11g1814 162 PANTHER CATION-TRANSPORTING ATPASE-RELATED 65 159 - -
Gso11g1814 162 Gene3D - 71 141 - -
Gso11g1814 162 Gene3D - 142 156 IPR023214 -
Gso11g1814 162 SUPERFAMILY Calcium ATPase, transmembrane domain M 82 135 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1814 Gso-Chr11 31199964 31203757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1814 65 157 Primary Pumps ATPases AT5G23630 76.344 5.10e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1814 K14950 - gmx:102664256 318.931