Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1802 ATGGAAATAATTTCTATATGGGTAGTATTTGTCACAACCCTTTTCCTCCTAAACATGACCAATTGTGTGGAGGATGAGGTGAAGAGAACACTTATACAGTTTCTGGCTCAAGTCTCAGGTAATGATGGCCAGCAGAACTCCACTTTGATTTGGAGACAAGACTCTTCTGATCCTTGCAAGGATCTTTGGCAAGGTGTATATTGTGATCCTCAAAACATGTCCATAAAGCGGTTGCTACTTGACAGGCTCAATTTGTCTGGAAATCTTGGTGTCGCTATGCTTTGCAACTTGCAGCCCCTGGCTGCATCTCTCGCCTTTCTTAGCCTAGATGGTAACAAAATTAGTGGGGTGATAGCATCTGAGATTGGAAACTGCAAACAACTCACTCACCTACACCTTAGTGGAAACAAACTTACTGGAGACATTCCTAGTTCACTTGCCATGTTAAACAATTTGAAGAGCCTCGACATTTCGAATAATGAGATTTCGGGACCTTTGCCAAACTTGTCCAGAATCTCAGGTCTGAACATGTTCCTTGCACAAAACAATCATCTTAGAGGAACCATACCGGCCTTTGATTTCTCCAATTTTGACCAATTCAATGTCTCCTTTAACAATTTTAGTGGCCGCATTCCAAAAAACGTGTATGGCTATTTCTCTGCTGATAGCTTCCTTGGTAATCCTGAACTATGTGGAGATCCGCTACCAAAAAACTGTTCTGATCAGTTTATGTTTCTTAGTGAGACTCAGGCAAAAGAAGAATCAAAGGGTCCTTCTAAGCAGCAGATTCTAATGTACTCGGGCTATGCTGCTTTGGGTGTTATCATTGTCCTTTTTGTAGTCTTAAAGCTGTGTAGAAGAGAGAAGGGAATTGAAGCATTGAAAAACGGGATAGGGGCCACTGATGGTGGTGGTATTGAAAAGCACAGCAATGTTTCAAGTGAATACAAAGATGAGGTAAGCAGATCCGAGTTTTCAGTGGCTTCTGAAAGTCGGATGGTTTCACAATCACTCATAGTTCTTTCAAGGCCAGCAGCAATTGAATTGAAATTGGAGGACTTGTTGAGGGCCCCTGCAGAATTGATTGGCAGAGGAAAGAATGGAAGTCTTTATAAGGTGATACTTGACAATGGGATAATGGTGGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCAAGATTTCAAGCAAAGAATGCAAATACTAAGTCAAGCAAAGGACCCTCATGTATTGTCACCTCTTGCTTTCTATTGCTCCAAACAAGAAAAGCTTTTGGTGTATGAATATCAGCAGAATGGAAGTTTATTCAAGCTTTTACATGGTACTCCAAAAACCTTTGACTGGACCAGCAGACTTGGGATAGCAGCTACAATTGCTGAGGCTTTATCTTTCATGCATCAAGAGCTAGGCCATCATGGTATTGTTCATGGTAACCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTTATGGGTATGGATGATCAAAGAGGTTCCATTTTTGCCAGTCCTATTGATGCCGGTGCATTAGATATCTTTAAGGAAGATGTTTATGGCTTTGGTGTGATTCTACTTGAATTGCTTACTGGTAAGTTAGTGAAGGGCAATGGGATTGACTTGACTGATTGGGTTCAGTCAGTTGTCAGGGAAGAGTGGACAGGTGAAGTCTTTGACAAGTCTCTAATATCCGAGTATGCAAGTGAGGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGATGTGTCAATCGTTCACCACAGGCTAGGCCAGGCATGAACCAAATTGCTCTCATGATTAATACTATCAAAGAGGACGAAGAAAAATCCTTGATCTATGAACTGTGA 1875 0.4123 MEIISIWVVFVTTLFLLNMTNCVEDEVKRTLIQFLAQVSGNDGQQNSTLIWRQDSSDPCKDLWQGVYCDPQNMSIKRLLLDRLNLSGNLGVAMLCNLQPLAASLAFLSLDGNKISGVIASEIGNCKQLTHLHLSGNKLTGDIPSSLAMLNNLKSLDISNNEISGPLPNLSRISGLNMFLAQNNHLRGTIPAFDFSNFDQFNVSFNNFSGRIPKNVYGYFSADSFLGNPELCGDPLPKNCSDQFMFLSETQAKEESKGPSKQQILMYSGYAALGVIIVLFVVLKLCRREKGIEALKNGIGATDGGGIEKHSNVSSEYKDEVSRSEFSVASESRMVSQSLIVLSRPAAIELKLEDLLRAPAELIGRGKNGSLYKVILDNGIMVVVKRIKDWTISSQDFKQRMQILSQAKDPHVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTPKTFDWTSRLGIAATIAEALSFMHQELGHHGIVHGNLKSSNILLNKNMEPCISEYGVMGMDDQRGSIFASPIDAGALDIFKEDVYGFGVILLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCVNRSPQARPGMNQIALMINTIKEDEEKSLIYEL* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1802 624 ProSiteProfiles Protein kinase domain profile. 356 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1802 624 Gene3D Ribonuclease Inhibitor 24 196 IPR032675 -
Gso11g1802 624 SUPERFAMILY Protein kinase-like (PK-like) 359 608 IPR011009 -
Gso11g1802 624 Gene3D Transferase(Phosphotransferase) domain 1 432 622 - -
Gso11g1802 624 PANTHER OS10G0387400 PROTEIN 2 623 - -
Gso11g1802 624 PANTHER OS05G0588300 PROTEIN 2 623 - -
Gso11g1802 624 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Gso11g1802 624 SUPERFAMILY L domain-like 54 218 - -
Gso11g1802 624 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Gso11g1802 624 Gene3D Phosphorylase Kinase; domain 1 321 430 - -
Gso11g1802 624 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Gso11g1802 624 Pfam Protein tyrosine and serine/threonine kinase 360 606 IPR001245 GO:0004672|GO:0006468
Gso11g1802 624 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Gso11g1802 624 Gene3D Ribonuclease Inhibitor 197 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1802 Gso-Chr11 30379761 30382461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1802 1 613 Receptor kinase-like Gene Family AT3G08680 33.231 7.59e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso11g1802 PK_Tyr_Ser-Thr 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1802 - - gmx:100813796 1221.84