Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1777 ATGAAGAAAACACCAGCCCCCAGTTTGCATAAATCTAACCAAAGAAAAAAGAATGTTGGATTCCAAGATAGAGGTGCAGCCAATGGTACACAGAGTCACCATGTTGAGAGCCATTCTGCTCTGGCATATTTCAAGTCTTCCTTCAAGAAATTTTTTACATTGTTTCTCTCTGGGAAGCGAAAAACAGACTCAGAAGCTGCTGAAAGTGATGACAGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCCACGGATGTATCATCTGATAGTTCCAAGAGTTCATCAAAAAGGGTGTTTTCTCATTGCTCTGCATCATCTGGCACTGCAAGTAGTAAGCTTGGAATGGGAAACTTCACCTTTGAGGAGATTTACAAGGCAACAGCAAAGTTCTCTCTAGAGAATAAGATTGGGGAAGGCGCGTTTGGAACAGTGTATAAGGGAAAGCTTAATGATGGAACCCTTGTGGCTGTAAAGCGTGCCAAGAAGGATTTACTAAACAAGAACTTAGCTGAGTTCAAGAATGAAATAAACACCTTGTCGAAAATTGAGCACATTAACCTTGTAAGGTGGTATGGATATTTGGAGCATGGACATGAAAAGATTATTGTTGTTGAATATATTAGTAATGGAACTCTTCGGGAACATTTAGATGGTATTCGGGGAGATGGACTAGAAATTGGTGAGCGTCTAGACATAGCAATTGACATAGCTCATGCAATTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACGTCAAAGCATCAAATATCTTAATCACCGATAAACTAAGGGCCAAAGTTGCAGACTTCGGTTTTGCTCGGTTGGGACCAGAAGACCCTGGTGCAACCCATATTTCAACTCAAATTAAAGGAACAGCTGGTTACATGGATCCTGATTACATGCGAACGCGACATCTCTCCGAAAAGAGTGATGTTTATTCCTTCGGCGTGCTGCTTGTTGAAATGATGACAGGAAGATATCCAGTTGAACCACAGAGACCTCCCAATGAGAGAGTTACAATTAAATGGGCAATGCAGTTGTTGAGACAAAAAGAAGTTGTGATTGCCATGGATCCAAGATTGAGTAGAAATCCAACCTCCAACAAGGCAGTGCAAAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCGGTGAGACGATCACGACCATCTATGAAGAGTTGTGCAGAGGTTCTATGGGAGATCCGTAAAGATTTTAAAGAAAAAGCATTTTCTCATCCTCCTCACCATTCTGCAGATTTCCCTCAAAGAGATGCTAGGAAGAATAGACATAAGACATATGGTATTGAAGACAGTAAAGGCTATAAATTTGTATTTGCATAA 1359 0.4054 MKKTPAPSLHKSNQRKKNVGFQDRGAANGTQSHHVESHSALAYFKSSFKKFFTLFLSGKRKTDSEAAESDDRKNTHKVRGVSSSTDVSSDSSKSSSKRVFSHCSASSGTASSKLGMGNFTFEEIYKATAKFSLENKIGEGAFGTVYKGKLNDGTLVAVKRAKKDLLNKNLAEFKNEINTLSKIEHINLVRWYGYLEHGHEKIIVVEYISNGTLREHLDGIRGDGLEIGERLDIAIDIAHAITYLHMYTDHPIIHRDVKASNILITDKLRAKVADFGFARLGPEDPGATHISTQIKGTAGYMDPDYMRTRHLSEKSDVYSFGVLLVEMMTGRYPVEPQRPPNERVTIKWAMQLLRQKEVVIAMDPRLSRNPTSNKAVQKVLKLAFQCLAPVRRSRPSMKSCAEVLWEIRKDFKEKAFSHPPHHSADFPQRDARKNRHKTYGIEDSKGYKFVFA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1777 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Gso11g1777 452 PANTHER OS01G0253100 PROTEIN 1 442 IPR045271 GO:0004714|GO:0006468
Gso11g1777 452 MobiDBLite consensus disorder prediction 1 35 - -
Gso11g1777 452 MobiDBLite consensus disorder prediction 63 96 - -
Gso11g1777 452 ProSiteProfiles Protein kinase domain profile. 131 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1777 452 Gene3D Phosphorylase Kinase; domain 1 89 207 - -
Gso11g1777 452 SUPERFAMILY Protein kinase-like (PK-like) 113 408 IPR011009 -
Gso11g1777 452 SMART serkin_6 131 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1777 452 MobiDBLite consensus disorder prediction 63 79 - -
Gso11g1777 452 Gene3D Transferase(Phosphotransferase) domain 1 208 425 - -
Gso11g1777 452 PANTHER OS02G0821400 PROTEIN 1 442 - -
Gso11g1777 452 MobiDBLite consensus disorder prediction 80 96 - -
Gso11g1777 452 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Gso11g1777 452 Pfam Protein tyrosine and serine/threonine kinase 132 404 IPR001245 GO:0004672|GO:0006468
Gso11g1777 452 Coils Coil 156 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1777 Gso-Chr11 27929820 27934171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1777 110 407 Receptor kinase-like Gene Family AT1G30570 41.611 7.70e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gso11g1777 PK_Tyr_Ser-Thr 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1777 - - gmx:100819818 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1777 11 27929820 27934171 Gso11g1777 11 27929820 27934171 ECH