Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1762 ATGGTGCAAATGGATACACTCCATCTTCTCTTCACCCTAGCTGCTCTTTTATCCGCATATTTCGTTTGGTTCCATCTCTTGGCTCGAACCCTAACCGGTCCAAAAGTATGGCCCTTGGTTGGTAGCCTTCCAAGCATGATCGTGAACCGCAATCGGGTTCACGACTGGATGGCTGCCAACCTCCGCCAAATCGAGGGATCGGCCACCTACCAAACCTGCACCCTCACCCTCCCCTTCTTTGCTTGCAAGCAGGCTTTCTTTACTGTCACTAGCAATCCTAGAAACATAGAACACATCCTCCGAACCCGGTTTGACAACTACCCCAAGGGACCCCACTGGCAGGCAGCCTTCCACGACCTCCTAGGCCAAGGAATCTTCAACAGCGACGGTGACACGTGGCTGATGCAACGAAAAACCGCTGCCCTAGAGTTCACCACCCGAACCCTAAGACAAGCCATGGCTCGCTGGGTGAACCGGACCATAAAAAACCGTCTTTGGTGCATTTTGGATAAAGCTGCTAAGGAAAATGTCTCGGTAGATTTGCAAGACCTTCTTTTGCGTTTAACCTTTGATAATATTTGTGGACTCACCTTCGGTAAAGACCCCGAAACTCTCTCGCCGGAACTACCCGAAAACCCCTTCACTGTTGCCTTTGACACTGCCACAGAAATCACCTTGCAAAGGCTTCTGTACCCTGGCATAATATGGAGATTCGAGAAGCTTCTTGGCATCGGTAAGGAGAAGAAAATACATCAGAGTTTGAAGATCGTCGAAACTTACATGAACGACGCCGTTTCAGCTCGTGAGAAATCGCCTTCCGACGACTTGCTATCAAGGTTCATAAAGAAGCGTGACGGTGCCGGAAAAACACTGAGTGCTGCCGCTCTGCGACAAATCGCGTTGAACTTCCTCCTCGCCGGCAGGGACACGTCGTCGGTGGCGTTAAGCTGGTTCTTCTGGCTCGTCATGAACCACCCCGACGTGGAAGAGAAGATTCTCGACGAACTAACGGCGGTGCTTACTTCCACACGCGGCAGCGACCAGCGGTGCTGGACAGAGGAAGCAGTGGACTTCGAAGAAGCGGAGAAACTGGTTTACTTAAAAGCAGCCTTAGCTGAGACACTGCGTTTGTATCCGTCGGTGCCGGAGGATTTCAAGCACGCGATCGCCGACGATGTGTTGCCGGACGGCACGGCGGTTCCGGCAGGTTCAACGGTGACGTATTCGATTTACGCAATGGGGAGAATGAAGAGCGTGTGGGGCGAGGATTGCATGGAGTTTAAACCGGAGCGGTTTTTATCGGTTCAGGGAGACCGGTTCGAACTGCCAAAAGACGGTTACAAGTTCGTTGCGTTTAACGCTGGACCGAGAACCTGTTTGGGGAAGGACTTAGCTTACCTTCAGATGAAGTCTGTGGCTTCCGCTGTGCTTCTGCGTTACCGGCTGTCGCCGGTTCCCGGTCACCGGGTGCAGCAGAAGATGTCGCTCACTCTCTTCATGAAGCATGGGCTCCGCGTGTTCTTGCAGACACGTCAGCTTCAACCGCAGGCCACCACGTCTGCATAG 1566 0.5275 MVQMDTLHLLFTLAALLSAYFVWFHLLARTLTGPKVWPLVGSLPSMIVNRNRVHDWMAANLRQIEGSATYQTCTLTLPFFACKQAFFTVTSNPRNIEHILRTRFDNYPKGPHWQAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKENVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFTVAFDTATEITLQRLLYPGIIWRFEKLLGIGKEKKIHQSLKIVETYMNDAVSAREKSPSDDLLSRFIKKRDGAGKTLSAAALRQIALNFLLAGRDTSSVALSWFFWLVMNHPDVEEKILDELTAVLTSTRGSDQRCWTEEAVDFEEAEKLVYLKAALAETLRLYPSVPEDFKHAIADDVLPDGTAVPAGSTVTYSIYAMGRMKSVWGEDCMEFKPERFLSVQGDRFELPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVQQKMSLTLFMKHGLRVFLQTRQLQPQATTSA* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1762 521 Pfam Cytochrome P450 87 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 Gene3D Cytochrome P450 27 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 SUPERFAMILY Cytochrome P450 23 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1762 521 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 5 513 - -
Gso11g1762 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gso11g1762 521 PANTHER CYTOCHROME P450 5 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1762 Gso-Chr11 25971768 25974527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1762 4 511 Cytochrome P450 AT5G58860 73.137 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1762 K15401 - gmx:100787559 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1762 11 25971768 25974527 Gso11g1762 11 25971768 25974527 ECH