Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1752 ATGACACCACCCTTTACTCTCTCCCTCTCCCTCTTCTCCATCCTCGCCGTCACCTCCGTACACGGCCTGGGCTCCGCTGCCACCACCGCCGTCACCTACGGCACCGCCACCGTGTGCGGCATCGTCGCTGGGGAGCCCCAGCACCGCATCCAGTGCTCCCGCAACGGCAGCCGCGTCGTTCCTCTCACCCTCCCCAACGCCTCCTTCGACGCCATCTCCGGCGGCCGGAGCTTCTTCTGCGGCCTCCGCTCCGGTGGCCGCAGCCTCCACTGCTGGGACACCGCCGCCACAACTGCCTCCTTCCGCCCAAAGAGAGTCTTCCACAGCGACGTGGTGCAGTTGGCTGACGTGGCAGTTGGCGACTCCCAGGTCTGCGCGAGAGAGGTGCAATCCGGTGTGGTACGGTGCTGGAGAGGAAGCGGTGGGGCCCAGTTCAGTTCCCCTTCGGAGAGTTTAAGGTTTCGGAGCATCACATGTGGCTGTGGTTTTTCATGTGGGATAGTAAAAGAGAGTGGAAGAGTTGTGTGTTGGGGTGATGATAACGAGGGTGCAAATAGAAAAGGTAGTATTAGTGATGAGATTCACAGAGAGTTTAAGAATTTCACCATGTCAAGTTTGGTTGCTGGGGTGTCTCATGTGTGTGGTTTGACTCTTCACGGGGCTTTGGTTTGTAAAGGGAACAATGATTCTGGTCAACTAGGATACAACAACAACAACAATGGTGGTGTTTTTTTAACAACTTCTTTGGATCATTTTTCAGGTCTTGCTTTGGGAGAAGATTTCACGTGTGGAATTAGGACTAGGAACGGTGTTGTTGTGTGTTGGGGTGGTGGTTTTGATAGTAATGTGGTGAAAGGTGTTTCTTTTGAGTCACTTGTTGCTGGTTTGGATTACGTGTGTGGGTTAACAACTAGGAATTTGACAGTGGTGTGTTGGGGTAAAGGTAGGTTTTTTCATCATGTGCCTAGTGAGGTTCCATTGGGTGTGATTCTTCCAGGTCCATGTGTTGAAGGTGCTTGTAGTGGTTCTTGTGGTACATATCCTGATTCTGGTGCTCTTTGTCATGGCTCTGGGAGTATTTGTTACTCTTGTCAAACTGAGATCCCACTAGCTGTTCCATTGCTTCCACCATCATCATCAACAACAACACAAGCTGTTCCAAATCAAGAACAACCTTCTTCACGTGGAGGGAAAAACAAAAACTTGAAGGAGTTTTTGGTTTTTTTTATTGTTGGATCAGTTGGTGCTTTTGTGGGGTTATGCACTATTCTCTATTTCATTTGGATTTGTGCAAGGAGGATTTTGTTGAGGAGAAAAGAAGTAGTAGTAGGAGGAGGTAATAATAATTCTGTGAAGCCTACTAGCTCAGAGAGTGATGCATATGTGGATATAATCCCCATGCCTAATTTTGGTTCCAATGGAACAACATTCAGAACATTTTCTAGCAAAAGTCGGGGATCAAGAAGATTGGGGAGGCATAGGAGTGGTTCATCGTCGAAGCGTGTGGACAGAACCGAGAGTTTCTCATTGTCTGAACTTGCAACAGCCACTGAAAACTTCTCATTGTGTAATAAAATAGGTGCTGGTAGCTTTGGAAGTGTTTACAAAGGCATGCTACGAGATGGTCGTGAAGTTGCAATTAAGAGAGGAGATAGTACTAGTACCATGAAGAAGAAATTTCAGGAGAAAGAGATTGCTTTTGATTCAGAATTGACCATGCTGTCACGGCTTCACCACAAGCACTTGGTGAGGCTAATTGGGTTCTGTGAGGAGAATGATGAGAGGCTCTTGGTCTATGAGTACATGAGCAATGGTTCACTTTATGACCACTTGCATGACAAGAACAATGTTGACAAGAGTAGCAGCATTTTGAATTCTTGGAGGATGAGGATCAAGATTGCATTGGATGCTGCTAGGGGAATTGAATACATTCACAACTATGCAGTTCCACCCATTATCCACAGGGACATCAAGTCCTCAAATATACTCTTGGATTCAAACTGGAATGCTAGAGTTTCTGACTTTGGATTGTCAAAAATTTGGCATGAGACTGAACAAGAATTGATGTCCACCACCAAAGCAGTTGGAACTGTTGGATACATAGACCCTGAGTACTATGTGTTGAATGTGTTAACCACAAAGAGTGATGTGTATGGTTTAGGAGTGGTGATGTTGGAGCTTCTCACAGGGAAAAGAGCAGTGTTCAAACCTGAAGATGGATCAGGCCCTATGGGGGTGGTGGAATACACAGGGCCAAAGATTGCATCAGGAGAGCTTTGGAGTGTGTTGGATTATAGAGTTGGTCATCCAGAAGTGAATGAGGTTGAGTCCATTCAAATCATGGCTTACACTGCTATGCATTGTGTGAACTTGGAGGGAAAAGAGAGGCCTGAAATGACTGACATTGTTGCTAACTTGGAGAGAGCATTGGCTTTCATTGAGGGCACCCCTACTAGCCTCTCCTTTGCTTCATTCTCTGCCCCTCTTGAATAA 2493 0.4677 MTPPFTLSLSLFSILAVTSVHGLGSAATTAVTYGTATVCGIVAGEPQHRIQCSRNGSRVVPLTLPNASFDAISGGRSFFCGLRSGGRSLHCWDTAATTASFRPKRVFHSDVVQLADVAVGDSQVCAREVQSGVVRCWRGSGGAQFSSPSESLRFRSITCGCGFSCGIVKESGRVVCWGDDNEGANRKGSISDEIHREFKNFTMSSLVAGVSHVCGLTLHGALVCKGNNDSGQLGYNNNNNGGVFLTTSLDHFSGLALGEDFTCGIRTRNGVVVCWGGGFDSNVVKGVSFESLVAGLDYVCGLTTRNLTVVCWGKGRFFHHVPSEVPLGVILPGPCVEGACSGSCGTYPDSGALCHGSGSICYSCQTEIPLAVPLLPPSSSTTTQAVPNQEQPSSRGGKNKNLKEFLVFFIVGSVGAFVGLCTILYFIWICARRILLRRKEVVVGGGNNNSVKPTSSESDAYVDIIPMPNFGSNGTTFRTFSSKSRGSRRLGRHRSGSSSKRVDRTESFSLSELATATENFSLCNKIGAGSFGSVYKGMLRDGREVAIKRGDSTSTMKKKFQEKEIAFDSELTMLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLYDHLHDKNNVDKSSSILNSWRMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSKIWHETEQELMSTTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKPEDGSGPMGVVEYTGPKIASGELWSVLDYRVGHPEVNEVESIQIMAYTAMHCVNLEGKERPEMTDIVANLERALAFIEGTPTSLSFASFSAPLE* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1752 830 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 823 IPR044815 GO:0004674
Gso11g1752 830 SMART serkin_6 520 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1752 830 Gene3D - 47 317 IPR009091 -
Gso11g1752 830 SUPERFAMILY Protein kinase-like (PK-like) 498 806 IPR011009 -
Gso11g1752 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Gso11g1752 830 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Gso11g1752 830 SUPERFAMILY RCC1/BLIP-II 60 277 IPR009091 -
Gso11g1752 830 Pfam Protein kinase domain 523 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1752 830 Gene3D Phosphorylase Kinase; domain 1 492 601 - -
Gso11g1752 830 CDD STKc_IRAK 526 808 - -
Gso11g1752 830 Gene3D Transferase(Phosphotransferase) domain 1 602 814 - -
Gso11g1752 830 MobiDBLite consensus disorder prediction 476 503 - -
Gso11g1752 830 ProSiteProfiles Protein kinase domain profile. 520 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1752 830 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1752 Gso-Chr11 24824569 24827301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1752 6 810 Receptor kinase-like Gene Family AT3G55950 50.000 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso11g1752 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1752 - - gmx:100802403 1619.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1752 11 24824569 24827301 Gso11g1752 11 24824569 24827301 ECH